LOCUS BEK96376.1 488 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae urease subunit alpha protein.
ACCESSION AP028459-4282
PROTEIN_ID BEK96376.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003895080.1"
/locus_tag="NSER024013_42820"
/note="frameshifted, insertion/deletion at around 4417359"
/transl_table=11
BEGIN
1 MAELSRARYA ELFGPTVGDR IRLADTDLLI EITEDRCGGP GLAGDEAVFG GGKVLRESMG
61 QARATRAEGT PDTVITGVVI VDHWGIIKAD IGIRDGRITA IGKAGNPDTM NGVHPDLVVG
121 PSTEIIAGNG RIVTAGAIDC HVHFICPQIL DEAMAGGITT LIGGGTGPAE GTKATTVTPG
181 SWHLARMLES TDAWPVNILL LGKGNTVRED ALWEQLRGGA GGFKLHEDWG TTPAAIDHCL
241 TVADASGVQV ALPSDTLNEA GFVEDTLAAI RGRAIHSYHT EGAGGGHAPD IITVASHLKV
301 LPSSTNPTRP HTVNTLDEHL DMLMVCHHLS SSIPEDLAFA ESRIRPSTIA AEDLLHDLGA
361 ISMIGSDSQA MGRIGEVVMR TWQTAHVMKR RRGARPGDGA ADNNRVQRYV AKYTICPAVT
421 HGLDAEIGSV EVGTLADLVL WDPAFFGVRR TRSSRAARSP GPPWATPTPP SPPRNRSSRA
481 RCSEPPRA
//