LOCUS BEK96336.1 1134 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae exodeoxyribonuclease V subunit gamma protein.
ACCESSION AP028459-4242
PROTEIN_ID BEK96336.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="recC"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_005113008.1"
/locus_tag="NSER024013_42420"
/transl_table=11
BEGIN
1 MHIHRAERAD TLADALAGLL ADPLGDPFTP EVVAVPAKGI ERWLNQRLAA VLGTGAGTDG
61 ISANIDFADP AALVTTVLAE ATGVDPEQDP WSPARLVWTL LPVLDEVLAE SWAAVLARHL
121 GQGDPGGYRV GRRYATAARI AALFDGYAAQ RPAMMTDWAD GRDTDGAGNA LPPDLLWQPR
181 LWRRLRGVVG VPGPAERLGA ACARLRAEPS IVALPERISL FGVTRLTTDQ LEVLSALSAG
241 RGVHLWLVHP SPALWTKLAD AEVIPNPGVR VRHPLLSALG RDVRELQQRL AGYDHIDTYH
301 PRPENDRQRP EAAHQRLEPG DRRPESGTQR SEATGPRTLL SELQAAVRQD RWSIMPDPSL
361 ADGTVAVHSC HGPSRQVEVL RDALLGLFGA DPTLEPRDVI VMCPDVESYA PLVRAAFGQW
421 SLDGAEPGHP AHGLRVRLAD RAQLAANPLL DVIGTLLELA DGRVTVTEAL DLCAAEPVRL
481 RCGFDDDDIE RLREWATETG ARWGIGQRQR QAFGLGDFAQ NTLNAAVDRI LLGVAAGESS
541 EDWLDLVLPL DDVDSNDIDL AGRFAEFVDR LAVCLRDLRG STLEEPAGSA RAAADWAAVL
601 GRALDLLTEV PNGQGWMGVQ ARRELATALE PAGRIPLRLS DIGALLTARL AGRPSRANFR
661 TGELTVCTMV PMRSVPHRVV VLLGLDDEVF PRAGGIDGDD ALARHRLPGD RDPRSEDRQL
721 LLDAIMAAGE RLVLLHTGSD PVTGAHRPPA IPLAELLDTV RAHVGASAMD RVVTRHPLQP
781 FDRRNFRAGE PFSFDTVALA GARAAGRAPA PRPLFLPAPL PHGERGDVEL AELVAFAEHP
841 VRAFLWQRLG IRVPEEEGEI ADRLPVELDG LTKWNMGERM LTARLTGVDP NVLRAAEWRR
901 GTLPPFAMGS AVLDEVEGTV DQLVRVARPL HEIPSRTIDI AVDLGEGRRL TGTVPDVHDD
961 ALLRTTYSRL APKHRMAAWI RLLALAATGT HQSWRALTIG RGQHRRPAWQ STLTAPTAAL
1021 ARGILRDLVA LRDEGLSEPL PIAPAASAAY AERRLAGGTP EDALLAAEKE FGDRFGEHTD
1081 RYLRHILGPA PRFQQLTEAA ARALPGVESE PTRFGELARR LWNPLLANEN QGQP
//