LOCUS BEK96335.1 1203 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae exodeoxyribonuclease V subunit beta protein.
ACCESSION AP028459-4241
PROTEIN_ID BEK96335.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="recB"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_011727605.1"
/locus_tag="NSER024013_42410"
/transl_table=11
BEGIN
1 MTDDLFSLTD PDLAPAPAPR TRRRSGSGAG EPRRESAAPE PVAADLFELP TATQAAGSDL
61 VAVTDEVPAG QGLWDDGAAS GGIGEVAGSA VVHEDLGNRF ELTGPLPVGT TVLEASAGTG
121 KTYAIVGLAV RFVAELGVDV SELLLVTFSR AATQELRERT RDRFVGVAAA LGDPERALAS
181 GDELIRHLAQ GNPGEIAARR ERLLAALSDF DAGTIATTHS FCQRMLDELG LAGEQDPGAR
241 LVEGIEDVVS TVADDLYLSR YARAGAPFGP ADAQRLAAAA VGDPHALLLP EAEGEGEGDP
301 AAERVGFAAA ARVETARRKR LSGLRDFDDL LVLLHGVLAD PEHGPLARRR IRDRYRVALV
361 DEFQDTDPLQ WDILRRAFHG HATLVLVGDP KQAIYAFRGA EVLSYLDAVA HADAKRELTT
421 NRRSDAGLLA ALEHLHGGAA RGHKEITVHR VAATRPFSRL SGAPERVTPL RLRCLPRSGA
481 GPLNKSGYPT VGRQRERVAI DVAADIVGLL ESGARIDAGT PGERPLGPGD IAVLVRNRNQ
541 LELVRAELEA AGVASVLAGG ASVFGTAAAT EWLWVLHALE QPHRADRVRL AAGTALLGLS
601 AADIDSGGAD LVGRLSAELR DSARLFARAG FAAVAEKLAA ETKLAPRLLA LEGGERQLTD
661 LRQLAQLLDD AALRESLGLS ALTRWLADRV RDPASGSVAG RSRRLDRDAA AVQIATVHAS
721 KGLEFPVVYL PFAWDAAKLR NPPTLLFHDE QGRRVLDVGG PDAPGYSARR LRAEAEEQAE
781 ELRLLYVALT RAGAQVIAWW APSYDTQTAP LHRMLLGREP GSPAVADKVP VPADSVVLER
841 IREWAATAEP GVVAIEPVRE FTRARLPVDD TATAAEPLAA AHFGRTLDQA WRRTSYSALT
901 AGAHDALPAA DLPEGGGVAD EPATPSVLAD DLEILAGAAP SLMNSLPYGA EFGTLVHEVL
961 EYVDTDAPDL AAEIHARCLH AVGEQMFDAD PDVLSGALLA VMHTPIGCGT LADFSTRDRL
1021 SELDFELPLA GGDDPTAARV TVPRIAELWR RHVPADDIFA PYADQLAHLD DTPLRGYLTG
1081 SIDAVLRTTG PRFLVVDYKT NRLGTGDLTV AHYTRDRMGA EMMRSHYPLQ AILYSVALHR
1141 YLRWRLPGYH PAEHLGGIRY LFVRGMIGPE TPGGAAVFDW LPPPDLIVEL SALLAGDTEV
1201 LPR
//