LOCUS BEK96136.1 433 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae IS607 family element RNA-guided endonuclease
TnpB protein.
ACCESSION AP028459-4042
PROTEIN_ID BEK96136.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="tnpB_1"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003415037.1"
/locus_tag="NSER024013_40420"
/transl_table=11
BEGIN
1 MSRHTTFQFC LDPTVEQRRV LDRYAGAARF AFNKSLDFVK AALTQRENDP DQQVPWTGFS
61 LINAFNAWKK TEAAGRVIRV DLLGVAEVEV TGLAWRSEVC QQVFEEAAVD CGRALTAFSD
121 SRSGKRKGRR VGFPRFKKKN STTPSFRLRN KISKSGCAGI RFGDNEIPRS VTLPCIGTVR
181 VREDTRRLRR LLGNGRAKVL YITVSFRAGR WQLSVTTEAA DLHPAFHHRP RAADDDSGWV
241 GVDRGLSSFL VAAAADGTDV AHVDNPPKPL ASGLRQQRRL AKSLSRKRKG SRNRKGAAAR
301 LARHHRRVAN IRRHFQHQVA NRLVKTHDRL VVEDLNVAGM LGNRCLAGAI SDAGWGDFGR
361 IVRYKQRWRG GTVVTADRWY ASSKRCSACT RVNTELTLSD RVFVCRCGFR ADRDHNAAVN
421 LAVWPMLQRE ASP
//