LOCUS BEK94905.1 386 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae ABC transporter permease subunit protein.
ACCESSION AP028459-2811
PROTEIN_ID BEK94905.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_015776809.1"
/locus_tag="NSER024013_28110"
/note="frameshifted, insertion/deletion at around
2965650,2965550,2966518"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MTAPISAGTA LGARVRSWCA TVGVLAGMEL RQRVRTTRWK ATLAAVFLVL SLGVFGSLYS
61 ATALSEATYR DWAPNLYTIV VGLELFLGVI LAPTLTATAI NGDRKDATLA LVQATPISKW
121 QLALGKLLGN WAACTALILI ASPYLIWGAA AAPYGFGWGL LGIMVLWIIF GCYCAVGLGF
181 SAVTARPAGS AVSTQATVFF LILGLPALFA LRLPTTARDH TVTIPSYGHP ADTLDWRDPK
241 VCTDTPIVWS LNHSERIWWL LAPNPFLIIP DLVAPHDPAP REPRYGSGRT ASPTIATELA
301 RQLSEARSGP YIVGPTCDES SAGFGAIGSD STDYYARERA HGDSQLGNSW YPGLLTTVAL
361 GALGFTVAAR RLSVPARRLP RGVRIA
//