LOCUS BEK94813.1 648 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae 1-deoxy-D-xylulose-5-phosphate synthase protein.
ACCESSION AP028459-2719
PROTEIN_ID BEK94813.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="dxs"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_011728575.1"
/locus_tag="NSER024013_27190"
/transl_table=11
BEGIN
1 MGVLSRVDTP EDLRRLSVGE LHELAEEIRE FLVRKVAVTG GHLGPNLGVV ELTIALHRVF
61 DSPADPIIFD TGHQAYVHKI LTGRKDGFDT LRKEGGLSGY PCRAESVHDW VESSHASASL
121 SYADGLAKAF ALTRQKRHVV AVVGDGALTG GMCWEALNNI AAGQDRSVVV VVNDNGRSYA
181 PTIGGLAERL AGLRTQPAYE HALDATKRIV QSIPRVGDSA YSMLHAIKTG IKDAVAPQEL
241 FSDLGLKYVG PVDGHDQVQL EAALKRAKDF GGPVIVHAVT QKGRGYKPAE DHEADQMHAI
301 NQIDPETGEP LGGPSAPSWT SVFSKELIAQ AEQRDDIVAI TAAMPGPTGL TPFGNRFPDR
361 MFDVGIAEQH AMTSAAGMAL GGLHPVVAIY STFLNRAFDQ LLMDVALLKL PVTLVLDRAG
421 ITGDDGASHN GMWDLSVLGI VPGIRVAAPR DAARLREELG EALHISDGPT AIRFPKGTAI
481 EEIPAVERFE GVDVLRLPDV PDAASYSAHA DVLLIAVGPF AELALKVADL LEAEGVSVTV
541 VDPRWVLPVS DTLVKMAENH RLVVTLEDSG LHGGIGSTVS ARLRSSGVDV PARDLGVPQQ
601 FLDHALRSKI HQELGLTPGE VAQRVHVWLG ATDTSASEIE DALLPAVE
//