LOCUS BEK94267.1 3597 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae hypothetical protein protein.
ACCESSION AP028459-2173
PROTEIN_ID BEK94267.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NSER024013_21730"
/note="frameshifted, insertion/deletion at around
2320544,2323116,2323085,2316147,2316220,2320511"
/transl_table=11
BEGIN
1 MASPFTPGGR MYRTGDLVRW RRRNGRWELE YLGRGDTQVK VRGFRIELGE VDAAVARHPG
61 VEMAITVGAT TPGGATALVS YVLAADSVVS PEAVQDTVAQ QLPAHMVPSV VMVLDTLPLT
121 PAGKVDRRAL PRPDFGTRAR AGRAPSTERE RLLAEVFAAV LGVESVAADD NFFALGGDSI
181 VAIQLVARAK AAGLGLRARD VFEHKTVAGL AAVASEVTAT VVEELPGGPV GPVALPPIVH
241 AMLDQGDTWP RFAQAVSIPL PRDIDHGRLT VAVQALLDRH DLLRSTLTHA PENGARPWAW
301 RVGAPGTVEA GALIEIVTAP ADSDGEDELQ RAADLLDPSA GIVARFVLIE REDALPLLWV
361 VLHHLVTDGV SWRILLPDLA TAWAGGTLAP VGTSFRRWAH GQVEQAPART AEIPFWRDIL
421 TTPDPGLGTR ALDPRLDTVA TMAQLRTVVD ADTATAALEL IPARFHCGLD DALLTALAMA
481 VAQLRGTRRT LLTVEGHGRE ESILPGADIS RTVGWFTSLF PVALKLDGID LDDAFHGGPA
541 AAAALKAVKE QLRAIPDKGV GFGMLRYLDP ESAGECAGAP TPQIGFNYLG RTGAGVEHPG
601 GAEIPWVPVR FASTQDDDAP LEAVVDINAF HTAAGLEVTW AYASRVLSAG VVRELAQLWG
661 RAVTALVTHA RHAGAGGHTP SDFPLVAVTQ PQIEEWERAY PNLTDVWPLS PLQYGLLFHA
721 RYDTDTADGY TVQTRLNLAG RVDAARLRTA AAALLDRHEV LRVAYVETAD GPRQLVLGEA
781 EIPWQEIDLT DIAEPAERQR ELARLIAVDA GTRFDLARPP LLRLCLIRTE PEAYTLLMTN
841 HHLALDGWST PLVVRELLAG YLAAITGQQI PGTPAHSYRE FLTWLGEQDD AASLAAWTEA
901 LAGVDAPTRA VPTLAGITST ESGMVTVEFD SARLERLTGT VRAAGATVNT AVQAAWALLL
961 AMLTGRTDVV FGGTVSGRPP QLAGVEEMVG LFINTLPVRV RLDPGERVDE LLARVQDEQA
1021 RLLDHQHVGL AAIHRAVGLP ELFDTLTVFE SYPIDRETLS RAMDIAGMRI LDVSGTDATP
1081 YPLNLMVIPQ RAADGGESLD LTVKFMTDEL PEAAARRLLD RFVLLLDQIA EHPQRRIAQL
1141 QHCDPVERLR LLPVYGGEAT PLRTLPDILA AGARANPEGI AVSSGPLSMT YRDLDAWSNR
1201 FARILLGRGV GRETFVVLAL TRSVESVVAV WALAKTGAAF LPLDPNYPVE RIEHILTDSR
1261 APIGVTVCEV GETLSGSIDW LLLDDLNTIR RVMTVSDAHI TDAERGGPIN LAQTAYLIYT
1321 SGSTGKPKAV LLSHRGLANL VASQQSLLDL DETSSALQVA SPSFDASVHE LLMAHGAGGR
1381 LVISPPDVYG GSALEELLRT EHVTHAVITP SVLATMNPDG LDQLECLSVA GEAAGPELVA
1441 AWSAGRRMVN LYGPTEFSVW ATGPGELLPG EPITIGAPIR GAAAMVLDTW LRPVPMGVTG
1501 ELYLAGPALA RGYFNRFGLT ATRFVANPYT LPGARMYRTG DMVRWVEVKT DDGAQLELEY
1561 LGRSDFQVKI RGLRIELGEI DAVLAADEQV DYAATLGCPG PAGQTVLVSY VVAAPGHSLD
1621 TELLRTRIAA ALPGYMVPSY LIELDDVPLT PVGKLDRNAL SAPDFATLAQ RYLAPRTPVE
1681 TAVAKVFADV LETDRVSIDR SFFDLGGNSL IATRVVARVN AALGATVALR DLFDAPTVAQ
1741 LSARIVPGTE IAGLPTLSAR IRPDRIPLSP AQQRMWVLNR LDPTSAAYNI TAALRLTGDL
1801 NIDALRHAVA DVVLRHETLR TLYPADADGP RQVVLSADAA APTIELADVE DGAPLRNRIA
1861 ELTGTGFDLT REAPLRVGLL RIAPSADIHV VVLVVHHISA DGASMAPLAT DLVAAYLARN
1921 AATRRPGISS GGTGEGGAAP EATAPADREP LRVQYADYSL WQRELLGDET DPESRAGRQI
1981 RYWKERLAAT PDVLELPTDR PRPAVQSMRS ADLEFRLGGE LHSALTELAA ATETSLFMVL
2041 HAALAVLLSR MAGTHDVVIG TAVAGRGEAA LDDLVGMFVN TLALRTPVDP AEGFGEFLGA
2101 VRATDLDAFA QAEVPFERLV QVLDPPRSTA QHPLFQVSLS LQNFAPPAVE FPGLRVEVEP
2161 IVRDASQFDL TFDLRTPLPG TDQAGLDGTL TFATDLFDEA TAARLVTRWE RILTAVTADP
2221 AVRLSDIDLL DAAERAALVP LRGPGQAGIA TLAQIFRTAA TGHRLCPAII ADGRVVAYRE
2281 LDTASQRLAM QLSAAGAGAE TVVALALSRG VELLTAIWAC AKAGAAFLPI DPRHPLDRID
2341 HMLTDSRAVL GLTTSAHRGL LPDTVGWLVL DDPSASSVRI ELGRGRIRSM PTHPDQPAWL
2401 IYTSGSTGTP KGVSVSHRGI GDLVRAQREL LALGEHCRVL QVASPSCDAS AFEALMAFGS
2461 GGTAVVAPPD VFGGQPLTDL IAAQGVTHLV ITPSALATLD PDAVSSVRVL AVAGEAIGPD
2521 LVARWSTGRT LINLYGPTEF TIWATASEPL VAGQPVTIGT PIRGAGTLVL DDRLRPVPMG
2581 VAGELYLAGP ALARGYHNRP GLTASRFVAD PYGRPGERLY RTGDLVRWTG YLDEPRLEYL
2641 GRTDFQVKVR GQRIELGEID AALSAADGVE FAVTLGVPGP GGATALAAYL LAEPGRQVDL
2701 AAVRAHAADR LPGYMVPSAF VVLDAIPLNA VGKLDRRALP APVFEAETEY RPPTTDLEKV
2761 LAEIIAELLG RDRVGVHDSF FALGGDSILA IQLVSRARLR GIELTPLQVF EHRTVAALAE
2821 LAAAAGETIV LEELPGGGVG ELPLTPITRW MLERGGDHRR FAQTAVLELP RGIDREQLVA
2881 TVTAVVDQHD MLRAQLAFVD GDWRLRTRPP GSVDVDALLY LIEFDTADRV ELREYAVTEL
2941 DSALGRLDPD NGTVLQLVWL DPAPDSPPDR RGRLILVAHH LVIDGVSWRI LIPDLIAAWA
3001 QISGGAQPIL TETGTSMRRW SYALTEAAEQ PARTAELDYW REIAATPDPR LGSRELDPAI
3061 DRVAAVRSVD VEVDAETTAT LLTTLPALFD GTVEDALLAG LALAIRRWRM EPIEAVLIRL
3121 EGHGRQQEIV PGADLSRTLG WFTTVYPVRL ALSGIPIRDA LSGGPAMGDA IRAVKHQLAE
3181 VPDKGIGYGM LRYLNPDTAA ELPARVPGRI GFNYLGRYAA ADIPAGLEDL GWLPTDEFGD
3241 LHAGEHPDVP VTAEIEINAV VVGDRLQASF SFPDTLLPRH EITMLAHLWT DALCAAAAFA
3301 ASPAAELAAE AERHYMTELR ERQAAAELAA SRSDSGPGLG LDVVLPIRPG GDEPPLFCIH
3361 PSSGIAWTYL GLADALAPGR PIYGLQAPDL SGEPHARSIA DFATRYVAEI RRLQPHGPYH
3421 LLGWSFGGLI AHAVAAQFEA HGDEVATLAL LDADSTDIDG GSIDKLTAGS FVATFGSVFG
3481 ITDIPADTSA EQAAELIGER MGGVSLVDAQ TLERMAASYN ASADTRTGYQ RPVFHGDALY
3541 FSATVHTSDI FGPEGWRPWI TGTISNHDID VSHEELTAPH ALAAIARILD AHLGGTP
//