LOCUS BEK93762.1 842 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae ATP-dependent helicase HrpB protein.
ACCESSION AP028459-1668
PROTEIN_ID BEK93762.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="hrpB"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_129699620.1"
/locus_tag="NSER024013_16680"
/transl_table=11
BEGIN
1 MKLPDLPDLP VRQALDDITR TLAERGTAVL VAPPGTGKTT LVPLALGAHT PGRVLVAEPR
61 RLAARAAAAR MASLLGERVG ETVGYAVRGD RRSGPGTRIE VVTSGLLVRR LQNDPELSGV
121 DAVVLDECHE RYLDADLLLA LLLDARAGLR PDLRVLATSA TVAADRLAVL LGDEAPAPVL
181 EVHGRAYPVA MDYVPPLARE RIEQQVARAT RMALADSAGD VLVFLPGAGE IRRTAEALSG
241 LPDIDVVPLH GRLAAAAQDA ALRPGARRRV VLSTAVAESS LTVPGVRAVV DSGLARVPRI
301 DHRRGLSGLA TVRVSAAVAE QRAGRAGREG PGHAWRCWPE YEHATLPAYP EPEIRTADLT
361 RLALELACWG TVDGQALAWW DAPPAGGLAA GRAVLRALDA VDDGGAVTDR GRRMAAVGLH
421 PRLARALLDG AAEVGARSAA EVVALLDDDS LAVSIDLVAA VRAVRADRPA RWEREAQRLA
481 KLMSSSGGQP DSRGGRGDSL GGSADSRGRR GNSRGGSGDD PALVAALAYP ERLARRRAPG
541 SASYLMVGGT AVTLPPGSGL GDAEWLAIAV AGRDPGQSEG RIRLAAKADE RLARQAAANL
601 LGSADEVDWV DGALVARRVE RLGAITLSEK ALPDPDPELV AAALLRGLRA EGLELLRWDE
661 DGRGLRQRLD FLHRTLGAPW PAVDDETLLA EAETWLGPEL SAARRRADLE RVDAGAALRR
721 LLPWPEAAHL DDLAPERLEV PSGSRIRVDY SADPPVLAVK VQEIFGWLEP PRLAGGRASI
781 LLHLLSPAQR PVAVTADLAS FWRTGWPQVR ADLRGRYPKH AWPEDPTTIT AHRGTARNAN
841 RA
//