LOCUS BEK93462.1 638 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae transcription termination factor Rho protein.
ACCESSION AP028459-1368
PROTEIN_ID BEK93462.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="rho"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_011730209.1"
/locus_tag="NSER024013_13680"
/transl_table=11
BEGIN
1 MPQLRALAGE LGIRGTSGMR KGDLIAAIKE NQSGGAGKTA ATGKATRNAK AKAEDAPNGG
61 ESASVKVAAA EPAAAKAEVK AEAQAEAPAK HVEKAEARQN SSETRESKRE EGDNARAEGG
121 EDARDGGQRG RGRQRRGREQ RGAGNAEATA AEAPAADKGE QSEGGERRRD RRNQGERNNQ
181 GERNQGERNN QGERNQNGGQ QNQNGTGRNN PRDARDDDDE EGGRGRRGRR FRERRRGRDR
241 EGGTGGGEAR EMEIREDDVL QPVAGILDVL DNYAFVRTSG YLAGPNDVYV SMNLVRKNGL
301 RRGDAITGAV RAPRDGDQSN QRQKFDPLVR LDTVNGTDVE SARRRPEFNK LTPLYPNQRL
361 RLETQPNKLT TRIIDLIMPI GKGQRALIVS PPKAGKTTIM QDIANAISVN NPECYLMVVL
421 VDERPEEVTD MQRSVRGEVI ASTFDRPPSD HTSVAELAIE RAKRLVEQGQ DVVVLLDSIT
481 RLGRAYNNSS PASGRILSGG VDSTALYPPK RFLGAARNIE NGGSLSIIAT AMVETGSTGD
541 TVIFEEFKGT GNAELKLDRK IAERRVFPAV DVNPSGTRRD DLLMSPDEAA VLHKLRRVLS
601 GLDSHQAIDL LVDRLKKTKS NVEFLMTVSK TAPGALDE
//