LOCUS BEK93172.1 352 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae DNA-directed RNA polymerase subunit
alpha protein.
ACCESSION AP028459-1078
PROTEIN_ID BEK93172.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_005055961.1"
/locus_tag="NSER024013_10780"
/transl_table=11
BEGIN
1 MLISQRPTLT EEVVSENRSR FTIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
61 HEFTTVPGVK EDVTDIILNL KGLVVSSEED EPVTMYVRKQ GPGTVTAGDI VPPAGVTVHN
121 PDMHIATLND KGKLEIELVV ERGRGYVPAV QNKASGAEIG RIPVDSIYSP VLKVTYKVEA
181 TRVEQRTDFD RLILDVETKN SISARDALAS AGKTLVELFG LARELNIEAE GIEIGPSPAE
241 ADHIASFGLP IEDLDLTVRS YNCLKREGVH TVGELVARTE SDLLDIRNFG QKSIDEVKVK
301 LHSLGLSLKD SPASFDPSSV VGYDAASGTW SDSGSFSDTD SGEQDYAETE QL
//