LOCUS BEK93124.1 5789 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae hypothetical protein protein.
ACCESSION AP028459-1030
PROTEIN_ID BEK93124.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023) to the DDBJ/EMBL/GenBank databases.
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished (2023)
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NSER024013_10300"
/note="frameshifted, insertion/deletion at around
1127171,1144396,1127283,1126622,1127166"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MWLLRQGTGN DSIRVPDHRV GPEGMSASEV VSAAGGRLRR FDGHEAIAER LLELGSGSSA
61 LVIDHYAGSA DEHGVGAHAY LLVNEGGKIV VKDPGTGREH GFPPEVPGET KGTHAILFEA
121 DGKAVDPLSE RTRQGLLMTR PGHTAHPQPE RPDDVLTRID EVRDAARQDL RDAIADLRKQ
181 TGLRVQESDL APGKLAETMK ALEDSKVRAS NGDPQPALDR VRDAAQRVHR AENLAHLVLE
241 ADRSHAARPA QAADPAHTVD PMHTADQAHA PDQAHAPDPA PAADPTHPSD QAHAADPARP
301 PAIDPVAEAR DFARRVAEAI ESGEATTELI SEGAFKSAQR VELVTFEDGT QLIRKLVTNP
361 EHANAEELAS LVGRAAGVEV PHVYRDPANE RIVYMEFMPG DTAGNHHAGE IDPAGRYRGT
421 PEGLRMGLFD ALLEIPDRNP GNWMVGPDGH LIGIDHSLAF GNDPRARNPI SQFARQFAEH
481 GDNREMVWRD HELNRSELAE VRARLEALAP EFERAGHPEW HEAMLDRLDR IEQHARPDEP
541 AHQAHPQSSD ANAAAPVHDQ ADQQHRDADH EGTAAHDPHP DWALQVEDHW SQLNAEQIQR
601 KLESDWDIDV FGFHDDLHPE VMREFARAIE AMFEKYPATN VRSIGIGELP RDVYARSPPE
661 KSPKVGWYGE KIVLNADLAA HPERMAEMAA KDEGTGHHVH GASDRPIYAT ILHEFAHGMD
721 WTGQGAARNR MLDALAEHYV AEHGNIVGFR HWLGRELSGY SFECRHSVNR AEALAEAFAD
781 VELNGDHASP AAKIIHQVLI DAMAEHTAKH PAEGGPRSRI EPPAKPTHDP AANSESAHSQ
841 PESEHPERHR PGAERGDEPR SSGRERAQPS DSRISGRPRR SGDDDQGQYS AHPHEGETPA
901 GGTRPTGHDD GRPVPPGEWA RETHEVSPAE RLAAPVEHWH SLDLPMDEWT AMSPSEVGEE
961 LTRRWGLEVT GFDDALVDPT VAREFARGVD DTMRRYPVAR NLKRVSIEEL SGRAYAHCEA
1021 KIGRPDAPLT FWNSDALVFK ADAIVLNARY AADYALMKSS VSRDEDTGFH PPGSGTRPVH
1081 STILHELGHA LDFESGKVSE WVRGRASKNA LRALRDYFEQ TRPDLGRKEF RAAFQDWLNQ
1141 LSAYSRSATE RPGRFGAGFG FKSGEAIAEA FMEVEYNGER ASEPAKVLYW HLMDNLEQHG
1201 RNSASYHLPA DAIARPTGPN PVEASPRTAG PRSVHDARGP EVPVAEPPAP VAEPHEEPPN
1261 PGFRHGVDPA VGQVDSGAAG TWEPVGATET HVPSDPVVAA RLDEYTAGAR EALHQAENVH
1321 RPEVDRLARE LGVNPTGLSP AELDRALVRG YAANPDHSPQ AVAVRRALAE ELSRDYGNLD
1381 EAGVARVHAR QLAIDEVLAA AADRVLRPGV GMADNPERIV VVLSPSDVPE HVLGTNFAKA
1441 LAYQRVPVEY HLVELAPDGT ITSRTIQPPE IHDAIPPSRR NLGDDAVPPA DRTQPRDAAP
1501 DSELAKPLDS RRGPSSEGPD GESGAPARGP ERPSEGPGST VEGTRPDLPV RPAAEHEVAL
1561 AETTTADMPA AQRDSGTPVR VFDPVDAAPA LRAVADYLGR TEAPPAMREH TPAERRYGQR
1621 LADALGLGDA LGRQRDPLSA MRDVAENARA RGNFGDPEGN RPPRAMRPED FGRLSDEDRF
1681 LPRRREPTGD APTRELPLEP WAEANRGPAE TEPQALSLPE LRQELADRLG LRPEDITPQR
1741 LPGLAGELQY RNLLRAGAIE ALGDAMDRHA AAVTEGGRRA YGVVRDEWAR LLGVDPEHLA
1801 RDPRRVLATL RDETLRRAGD VADLLAATYH EPDPASRPRL VLEADGHRVH VEVETGADGA
1861 HRLRTVDRPK LPIEPKSGVP EKKPGFFRRL WRSIKGYEGQ YPKYMSGNPH GGDGAGQAEV
1921 IRGVGYLAGH EFPYTDKPGD PLEHVLEGHE FPDAVAEAPF ARVVKEGVTV VQQRERMLLL
1981 ELLPGRVPHV SADMVPMRTR DGGEYTYEYA EADPELRAKE AAGVPAELFL PEPPERRSDP
2041 VTPSPELPEP PQHHWDSKLP EPVARAFESR DAALREMARL AAEHGIRLTD ANPVALRRAL
2101 AEEAYRLVRR AGAIEALDEV GQRFNFHEAM RPTRPVAMDD KNPMARYVRE DYAADERDRL
2161 RDNPDAKPRP TLLDAVGTNN NGEWARHFDA PEEGFPQSER GQLFRDALMR DQTREERSNW
2221 AQLLDIELDK LGPGRGGLEH TIAEQRMAVR DERDRLDELA GAVEHFIELD DRARQQAQLL
2281 ADRTGHAWMD AQGGAMLEPG IGVRPGEHPG DPNRLVVLSG AEDHNARLVA ALAEHSELAG
2341 MLNRGELRLD YRDVAVNTDG AVHVAERPAP QVRFHDPEVG GERTPALMVR DGHEPWRIVQ
2401 PEGGPAVPEP ATPAHPSGPP RDPAVVRAEF EEVAARLGEK NLNLGDNLDR TIAALRQDNL
2461 LRAAQVEGMA DYMRSSDAIE NFYEFSNKLG DLAHVLGIDA QEMSPQRVAE AITEPKMNRA
2521 HRAQAIGDLL DYGHELYDRT KQMHDPDEVK NARTVLAARD RLARRFGLEP EEAFGSGYRK
2581 DENKKIVGYG PNPETTENSA IVHAIRDALG RAGERPQVVA ALAEYAHALG QVDKYHPNMR
2641 FDPRADPRAA DGVLPIHDAD ALKLLSGLSG ENLGEPPLSR EPSRAEGVWS HLLGVDVEDV
2701 DRIVKLYRKE LPGLHDRMPP EKFERLLRDL GDATQDPGIA YAEYRIGLDP KAEPMSAHEL
2761 RELVTAVREA RFAEVYEVYR DGKIENHERP KPDELKRMLG EMREEIRGRE ADIDALERLV
2821 REHAALPAPS EPEAPPRSPR EVATELAEAR RAREVAGARR DAAVGRIDTG SDRALRHSDL
2881 SPHRLDGTVE YLTTPIAEDG GHRLNNKERL TELHRAATDY NEAHALVEDR EAQLRAAVAA
2941 ARGPGEDSVT VWGREAYAAR DDLLRAAAEA PGNWPGRPDQ VVERLDEISR GNEKFGFQLP
3001 RELQPLHDAA QRYRNAMDFL GAARPDPIEI VRAGETPRTQ AERELRYARQ DADIAEMARD
3061 NALAGLPVTA PDRTRDWIAS TRTEFGDTPR DRLTPQQRGL LDLADAAEHH LDAQDRSARW
3121 QAQLDHLDTD ARNAADTPRA AAARALDQAH AALRNAIADV REEMGLHIEE SELSRARLAA
3181 TMADLSNRTV ITPGGAADPD AALHAMGAAD RMRVAAEKLH GAEDFAHWID EHTAAPGHGE
3241 DPGSGPARPG EDPGGGSDGR PTPPEPGGKP GSDGAGADPA VTGSREGDRG AVPDSEMRRP
3301 LDSRSGASGH DPEAGKDPAA GDPAVPVPDP AAAHDPGAVV PVEPPRPGEN QSQAGPESVN
3361 PTAVSPTLKA VADHLAGAPL EHNARQRTPE ELAYLARLAD GLGMVEPLSK RPDALASLQE
3421 LAEMARARGF FGDPDTGVGP ASMRGAEDFR PLTTEERYGG EEYWRSEVDP RELAAIEAEF
3481 RDLGIDDRLN RADAEAAADA RKALEQNASG PDGPRPNLPL EPWSDSMRHA GEPRALTLDE
3541 LRRDIAARLG LSDADIAADR LADTAGELQY RNMLRAGGIE ALDEAATRHD AATDPEQRAR
3601 LAQIRDEWAR LLRVDPDRLA PEHRAATLAE LRAETIRRAD DVADLVAATY HEPDPNGPQR
3661 LVLESGGDRV HVAVRTDADG VRHLEPAARP ALPGDRLPVK PDPVRPPFLR RLWDFVRAGF
3721 NDQYPKYASG SGIDGKGQKE IIHEVGGWLH NDFLEHLEIN PSRLGKEFAT LWKAREDLPL
3781 LNRLTARVAD AASAHVPMRT RDGGEYQPWR SEVDPATRAR AAQDLHRANI SEGEPAQAGH
3841 RPDPVTDPVA VAQREHLPEL PSGAEHPAAH TENTGAQPDP ATTLRHGSGD PRDVLPKTLA
3901 DGLEVRDRAL GEVLKQAARQ GIDLRSADPA TLRRLVDEST YVLLRRAGAI EALYEAAQRY
3961 NMEDARVPFS RSINFFDKDP LGRFLRELVH SDPTRKDWAI TRLARKIGLI GKDDPHYTAL
4021 EWDGTPNGGE PARTFDDLSP EELATRKEGV LFENALMRDQ IREERSNWAQ LLGVGLDELT
4081 PERLAHTVAE LRMAVREHAD QVVDLGHAVD EYLRTDTEVR RTAEDIAEDA ARTWVSEHGG
4141 AALDRGVAIL PGKPPHLSVL RAGGDHERVL AAYLAEHPEI GRQLNDGRLQ VDFRLVRMDD
4201 QGGLHVLAEH TPEVRFHEPE LGGEKVPATT VRDHPSRPWR VVEESPAAPS AHPEPEPPPR
4261 SVDELRTARD ELAKKLVVYR EDLTPDKLAD TIAAMQLDNA LRAAQIEGMA DFIDTSDGIA
4321 SFYDLNDALQ QLGHRLGLEP NELNPRSMAE ALADPGLRNV RRLQAVQDLV EYAAHVRDVD
4381 EAASLAARDR LAERLGVAPE SLFADKYDKK ADVFRPDSAS IEPASLLRAI NDMMHRSNER
4441 PELLAALTEY AQSLSRIDPF HTDLRFDPAT DPRVAEGELP IRDTAVPAQL RGFRHELIGE
4501 PPRSDDPSRA GAVWARLQGL ELGDDPARLA KAYEAYRDGK IEKFERPTDD DTRTAVEELR
4561 AETRARAADI EALRKLAEEY NAVTAPAGPD PAPPRPRAAA IELDGARTDF ERAGRARDYA
4621 LSRITHPDAH EPHLEGAPGR RIGPSDLTPQ RLASTLEHLR QLPVPEGGRP GHETRIAELA
4681 AAVEHYNTAQ TRVRAAEHDL NRALMASARP GETPLDTLHR ELEQALGGRE RAMRGVRVEA
4741 ADLTPERFRD ALDEAAQYAR TPEEHAAIGE RIQRLHDAAV RVHQIQELIA GHEFAAAAEA
4801 RAAESPLDAA RRESTAAQRE LRAAQADRDA LMTAPEPHGA EEFAAHDAAL RAAVDRVDQA
4861 RAAADRWSTE LKRLWAAETR AAVTPHEAAA QARSDAHAAL RQAITDFHAA TRVRVAESDL
4921 TPARLDSTLE ELQGKTVLAN GPGSATAFED LRRAAEHSHR ADALAHWVED NIPHPHAPAS
4981 TPPPPGHEGE DPIGGTPAKP TDPTQPNSDP SAHPVPVPES HPKSDPNDPD TWFDRMQAEQ
5041 ADWSAQMEAK RAQWLHDIAD RMEPGSTEER FARLRAENAD RLARIAADRA DWFWDQAGGR
5101 PDTPEPDAPT PGPDGPDSGG GPRPDAGFND GAAQPKPDPD PGTAEGGRAP VARHESQPPT
5161 GPTEAEHVAG AEAHPAEPAP EPPRGEAGEP VGGKTPAVGQ PESPSNDGGT ESGQGGAGDP
5221 GAPRSEQKAV DDENASGGRG SPPKAAEDTG YGPTPSGENE ATATGATSAG KAAANGEETR
5281 ADGAGAHAGG DEAGARGKEV SEGSSSGPVV RDSERSGPDW RHVRSHLPKV PQQFDPQFPQ
5341 YTPQPSQQAA PWALPPDANP QPPAPPNPPP PPNPPAPPYP PQPPYSQGTP AGPGGAGAPS
5401 YPGGPAGAGG AIPGRPQLPE IPQLPEVPQP PAMPPGGAYP GAPTPPGGWP NGQQPPWGSW
5461 PGAPAQPGGS PQWPDGFQQW ADGLPQWANG TQQWERDSQQ WLDGTQQRPD GSQRWPDGSQ
5521 QWTDGNQQSA NGSQHTSNGN PHSPGAQYPH HPGSPSMPGQ QPHGPHVPGG HGGPSGGGPR
5581 GPLGVPGWNG LPDSMFGGEV ANGGGASGDG GDGGGANGTP QGGPPAGPAG GSGGQQQGGT
5641 GGGQVRGGNR FPRASGPVSS GSGVYLRSHS GFGEFAMLNP ATGELNSAPV GAGSLSGVYD
5701 DMDGLRVAFY RDQQAGLVLR VGDQAIELDR LGADAHWERT QHGFNRLLVG VGGTPQVEVR
5761 YRTVPQDADL GLLVRDVLSD PARRAGIFG
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