LOCUS BEK92120.1 491 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae D,D-transpeptidase PbpA protein.
ACCESSION AP028459-26
PROTEIN_ID BEK92120.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="pbpA"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003891359.1"
/locus_tag="NSER024013_00260"
/transl_table=11
BEGIN
1 MNTPLRRVAL AVMVMIVALL ANATYVQVFK ADSLRNDPRN VRVLLDEYAR QRGQISASGT
61 VLASSVATDD RYKYLRTYPT DPLAYAPATG YYSMQYGSNG LEHAEDSVLN GSDNSLFGRR
121 LIDMISGRDP RGGNVVTTLN PVMQKVAYEQ LTAKNLTGSV VAIEPSTGRI LTMVSTPSYD
181 PNLLAGHDGA ATQKTWEQLQ QDPRQPMLNR AVSQTYPPGS TFKVVVTAAA LSNGIAKPDD
241 QLTAQPRITL PDTTTTLENY NGSHCGPGDA QTVSLTEAFK YSCNTAFVEL GIKVGAAKLK
301 DTANAFGIGT QHPNIPIPWA DSTVGTIPDN AALGQSSIGQ RDVALTPLDN AVVAATIANG
361 GVRMKPYLVD QLQAPDLSTL ETTKPTSVGQ AVTPQVATQI TNLMLESEKN TQGGTQPRSY
421 QIASKTGTAE HGSDPRNTPP HAWYIAFAPA QNPKIAIAVI VENGGDRALA ATGGSVAAPI
481 ARAVLDAGLG G
//