LOCUS BEK92099.1 683 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae DNA topoisomerase (ATP-hydrolyzing)
subunit B protein.
ACCESSION AP028459-5
PROTEIN_ID BEK92099.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="gyrB"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003891333.1"
/locus_tag="NSER024013_00050"
/transl_table=11
BEGIN
1 MAAMDSNAEG STPPKNGKPS NYGAESITVL EGLEAVRKRP GMYIGSTGER GLHHLIWEVV
61 DNSVDEAMAG YASRVDVTLL ADGGVEVVDD GRGIPVAMHA QGVPTIEVVM TQLHAGGKFD
121 GESYAVSGGL HGVGISVVNA LSTRLQADVD TDGFHWTQEY KDSKPGKLVQ GGPTKRTGTT
181 IKFWPDPEIF ETTTFSFETV ARRLQEMAFL NKGLTITLTD QRVAEGDVID EVVSETAEAP
241 KHLDENAAVA APKIKTRTYH YPGGLEDFVK HINRTKTPIH NSIVAFTGKG TGHEVEVAMQ
301 WNSGYSESVH TFANTINTHE GGTHEEGFRA ALTTVVNKYA KDKKLLKEKE GNLTGDDIRE
361 GLAAIVSVKI ADPQFEGQTK TKLGNTEVKS FVQRTCNEHI SHWFEANPAD AKTIVQKAVS
421 SAQARVAARK ARELVRRKSA TDLGGLPGKL ADCRSKDPSK SEIYIVEGDS AGGSAKSGRD
481 SMYQAILPLR GKIINVEKAR IDRVLKNTEV QSIITAFGTG IHDEFDIAKL RYHKIVLMAD
541 ADVDGQHIST LLLTLLFRFM RPLVEHGHVY LAMPPLYKLK WQRSEPEFAY SDKERDGLLE
601 RGLSAGKKIN KDDGIQRYKG LGEMNPKELW ETTMDPSVRV LRLVTLDDAA AADELFSILM
661 GEDVEARRSF ITRNAKDVRF LDV
//