LOCUS BDN85306.1 511 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii type VII secretion integral
membrane protein EccD protein.
ACCESSION AP026367-5521
PROTEIN_ID BDN85306.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003399976.1"
/locus_tag="NJB1907Z4_C55210"
/transl_table=11
BEGIN
1 MSAPAVAAPS AATGTTPPKP ATTRVTVLTG RRLTDLVLPA AAPMESYVDE TVAILADLLE
61 DTSAEVLAGF DFEAQGVWTF ARPGFPPLKL DQSLDEAGVV DGSLLTLVLA SRTERYRPLV
121 EDVIDAIALL DESPEFNRTA LERFLAVAIP LFALPITAVA MRAWWQTGRS VFWPLAIGLI
181 GLAALAGSFV AKRFYQNSRL AESLLVTSYG VIAAAAAIAV PLPRGFHSLG APQLAAAATA
241 VLFITLMMRG GPYKRHDIAA FVVITSIAVI SAAVAFGYGY QQWVPAGAIA FGLFIVTNAA
301 KLTVAVARIA LPPIPVPGET VDNEELLDPI TAQDATNEET PTWQAIIASA PASAARLTER
361 SKLAKQLLVG YVTAGTLILA VGSIAVVVRG HFFLHSMIVA GLITVICSFR SRLYADPWCA
421 WALLAATVAI PTGLAVKLSL WYPHYAWLLL TIYLAAALVT LISVGAMNQV RRVSPVMKRA
481 LELFDGAMVA SIVPLLLWIT GVYDLVRNIR F
//