LOCUS BDN84728.1 348 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii isopentenyl-diphosphate delta-
isomerase protein.
ACCESSION AP026367-4943
PROTEIN_ID BDN84728.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="fni"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:A0QRB5"
/locus_tag="NJB1907Z4_C49430"
/transl_table=11
BEGIN
1 MTNDPAEISS RKRRHIDVCL NDEVNYVGVT TGLERYRLPF NALTQTSLAD IDLSAEFFGA
61 PLRAPVLIGA MTGGAELSAM INRNLATAAQ RLGIGMMLGS QRIMLDDARG QRAASSFAVR
121 EVAPDVLLIG NIGLAQLTKA AVPAVAAALR RVGANALAVH ANSLQEAMQH GGDTDFSGSL
181 GRLRDAADLL DYPVLLKEVG HGIGAAAVAQ LLRLPGGLPV SGIDVAGAGG TSWSRVEQLV
241 RYGELRYPEL ADWGIPTAEA IVEVRQALPA VPLVASGGIR TGMDAAKAIA LGADVVAIAR
301 PLLAPAIESA TAVQDWLQLF LDELRVCLHC CGAPDLTSLR DIGVTAIR
//