LOCUS BDN84164.1 667 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii monoacyl phosphatidylinositol
tetramannoside-binding protein LpqW protein.
ACCESSION AP026367-4379
PROTEIN_ID BDN84164.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="lpqW"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003406102.1"
/locus_tag="NJB1907Z4_C43790"
/transl_table=11
BEGIN
1 MGAPRERERD ASAKSGSVFR SCITREDRLD TLVGVFSPVR RVCLTVGVLI TALGVALSGC
61 TVSPPPAPQS TDTTHNTPPP PPHPTQIIMG IDSIGAGFNP HLLSDLSPVN AAISALVLPS
121 AFRPVPDPNS PTGSRWDMDP TLLVSAEVTG QSPFTVTYKI RPEAQWTDNA PIAADDFWYL
181 WRQMVSQPGV VDPAGYDLIT AVQSLEGGKQ AVVTFAQPYP AWRELFDNLL PAHIVKDVPG
241 GFAAGLARTL PVTGGQFRVE NIDPQRDEIL IARNDRYWGP PARPSLILFR RAGAPAALAD
301 SVRNGDTQVA QVHGGSAAFA QLSAIPDVRT ARIVTPRVMQ LTLRANQPKL AEAQVRKAIL
361 GLLDVDLLAA VGAGSDNTVT LDQAQVRSPS DPGYVPTAPP ALSTSAALAL LEGAGYQIES
421 NTSVSPAPPG PGSTTTPVST GPPEVIRGGI SKDGRQLTLV IGVAANDPTS VAVANTAADQ
481 LRNVGIAASV LALDPVTLYG DALNDNRVDA IVGWHQAGGN LATLLASRYG CPALQTTEVW
541 EPTIPANTPA ATTGSMPSAV PSAVTPVPPA PSEPPGPNAL FRAPSNLTGI CDPSIQSNID
601 AALNGTKNIN DVITAVEPRL WNMWTVLPIL QDTTIVAVGP SVRNVSLSGS VPVGIVGDAG
661 QWVKTGP
//