LOCUS BDN84141.1 543 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii pyrroline-5-carboxylate dehydrogenase
RocA protein.
ACCESSION AP026367-4356
PROTEIN_ID BDN84141.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="rocA"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003900286.1"
/locus_tag="NJB1907Z4_C43560"
/transl_table=11
BEGIN
1 MDAITQVPIP ANKPVHSYAP HSPERSRLKS ELIALAQQPI DLPHVIGGKH RMGDGERIDV
61 VQPHRHAERL GTLTNAVHAD ATAAIEAAMA AKNGWAAMPF DERAGVFLRA ADLLAGPWRE
121 KIAAATMLGQ SKSAYQAEID APCELVDFWR FNVAFARQIL DQQPVSAKGE WNRTDHRPLE
181 GFVYAITPFN FTAIAANLPT APALMGNTVV WKPSVTQTLA AYLTMQALEA AGLPPGVINL
241 VTGDGLAVSD VALTDPRLAG IHFTGSTATF QHLWQQVGAN IASYQSYPRL VGETGGKDFV
301 VAHSSARPEV VATALIRGAF EYQGQKCSAA SRAFIPHSVW QQMGDTFLDT AAGLKYGDII
361 DLSNFGGALI DRRAFIKNVD AIERAKGAAG VTIAVGGEYD DSVGYFVRPT VLLSDDPTDE
421 SFAAEYFGPV LSLHVYPDDQ YERILDVIDT GSRYALTGAV IADDRNAVLT AQNRLRFAAG
481 NFYINDKPTG AVVGRQPFGG SRGSGTNDKA GSPQNLLRWT STRTIKETFV PATDHTYPHM
541 ESD
//