LOCUS BDN83933.1 498 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii formate hydrogenase HycE protein.
ACCESSION AP026367-4148
PROTEIN_ID BDN83933.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="hycE"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003400663.1"
/locus_tag="NJB1907Z4_C41480"
/transl_table=11
BEGIN
1 MAHKTVSRTV SDAEFAESVA ELLAEGYRLA LVVAHDDGDA LRVVYLLVAG QPDRRVELTL
61 RTGAANPSVP SLAELSIPAG RFEREMMDLY GISPVGHPQP RRLVRHAHWP QDWHPMRRDA
121 GDPPPFDAVG RFPFVTVEGP GVYEIPVGPV HAGLIEPGHF RFSVIGESIL RLKARLWFVH
181 RGVEKLFEGR NALGAREAVE LAERISGDSS AAHSLAHCLA VEDALGLDVP EPVHRLRALL
241 VELERLYNHV TDLGALANDV GFALANAHAQ GIRERVLRIN RRVTGHRLLR AAMAPGGVVL
301 QELPDPAELH AVAAEVAEIS ELTLRNSVVY DRFAETAVLH SEDARALGCL GYVARASGIA
361 TDARLDHPTA ELPVTAVAAG GGDVLARYTI RRDEFAASVA LACHLVENHH GRTRFAPPPA
421 ANGARSALTS GVGIVEGWRG AVLHRVEVDG AGRITRCKIV DPSWFNWPAL PVAMADTIVP
481 DFPLANKSFN LSYAGNDL
//