LOCUS BDN83822.1 580 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii long-chain-fatty-acid--AMP
ligase FadD28 protein.
ACCESSION AP026367-4037
PROTEIN_ID BDN83822.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="fadD28"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WQ59"
/locus_tag="NJB1907Z4_C40370"
/transl_table=11
BEGIN
1 MSVRSLPAAL RACARLQPND PAFTFMNYEQ NWDGAAETLT WSQLYRRTLN VARELSSCGS
61 VGDRAVILAP QGLEYVVAFL GALQAGRIAV PLSVPQGGAS DERATSVLRD ASPVAILTTS
121 PVIDDVTQHV SAQSAGPAPS IIELDRLDLD AAAGSGAGTE NYPATAYLQY TSGSTREPAG
181 VMLSHQNLVT NFEQLMSGYF ADTDGIAPPD STLVSWLPFY HDMGLVLGVC APILGGYQAV
241 LTSPVSFLQR PARWLQMLAT SSHAFSAAPN FAFELAAKKV SDDDMAGLDL GNVLTILSGS
301 ERVQPATLKR FADRFARFNL QEKVLRPSYG LAEATVYVST SRPGQPPELV EFDAESLSTG
361 QAKQCESGAG TQLVSYVLPR SPIVRVVDPD TCTECPDGTV GEIWVCGDNV AIGYWNKPEE
421 SERTFGGKLA SPSEGTPEGP WLRTGDSGFI TDGKMFIIGR IKDLLIVYGR NHSPDDIEAT
481 IQEITRSRCA AISVPGDRST EKLVAIIEYR RRGDSDQEAM DMLVAVKREV TSALSNSHGL
541 SVADLVLVAP GSIPTTTSGK VRRAACVEQY RQQQFARLDA
//