LOCUS BDN83643.1 440 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii mammalian cell entry protein protein.
ACCESSION AP026367-3858
PROTEIN_ID BDN83643.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_011727446.1"
/locus_tag="NJB1907Z4_C38580"
/note="frameshifted, insertion/deletion at around 4239297"
/transl_table=11
BEGIN
1 MPNSIESDGR GPSDRQLIGI GLVVVLLAAV LTIALLVKST GRLNDYVRVT ADLRNVGDGL
61 PKRSDVKYHG VLVGMVDGVA PAANGRPNYV HINLKPEYAA SIPAAVTARV VPSSVFAVSS
121 VQLIDAPAPR GRQPAIRAGT HIPEDSRLPT VLFQTTVSKL RDLLAAAGRG REDNSLGILA
181 AIAAATDHRR APLLSGGAQL NRLLDQLNSI VATDSEPSTV AALIDATRGL QASAPELVEA
241 LHQAVEPMKT FAETRAQLAA LLAGADHTIG TAQQSLGNHI DQLIQITTDF TPVLGVLAQQ
301 SDNFLPAVIK LDNLATKFMD EVWMPENNTG NMRVNLSFTP SHSYTRADCP RYGELKGPSC
361 FTAPLVPVRP DLPEVLLPQN YQPPKDLAPP PGTAVGPDGN LVALGPPLIN PSPNLTDPNP
421 PLPAWLTPSP RVPGTGDRGP
//