LOCUS       BDN83562.1              1008 aa    PRT              BCT 09-FEB-2023
DEFINITION  Mycobacterium pseudoshottsii ribonuclease E protein.
ACCESSION   AP026367-3777
PROTEIN_ID  BDN83562.1
SOURCE      Mycobacterium pseudoshottsii
  ORGANISM  Mycobacterium pseudoshottsii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (bases 1 to 6051062)
  AUTHORS   Komine,T., Fukano,H. and Wada,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-2022)
            Contact:Takeshi Komine
            Nippon Veterinary and Life Science University, School of
            Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
            Japan
REFERENCE   2
  AUTHORS   Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
            Kurata,O. and Wada,S.
  TITLE     Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
            pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
            Japanese Sardine (Sardinops melanostictus) in Japan
  JOURNAL   Microbiol Resour Announc 11 (12), e00785-22 (2022)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/mra.00785-22
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Flye v. 2.9; galaxy v. 0
            Genome Coverage       :: 189x
            Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019-07-10"
                     /db_xref="taxon:265949"
                     /geo_loc_name="Japan:Tokyo"
                     /host="Sardinops melanostictus"
                     /isolation_source="liver of Japanese sardine"
                     /mol_type="genomic DNA"
                     /organism="Mycobacterium pseudoshottsii"
                     /strain="NJB1907-Z4"
     protein         /gene="rne"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_003899322.1"
                     /locus_tag="NJB1907Z4_C37770"
                     /transl_table=11
BEGIN
        1 MVDGAPSSDP ENEPTQREDL PDRLRVHSLA RTLGTSSRRV LDALSALDGR IRSAHSSVDR
       61 VDAVRVRDLL AEQPAEEGQA EEGQQAPDAV AAEVPDAPGE PAEPESRLML ETQETVQVVE
      121 TWVERPHYMP LFVAPQPISE PVAGDDADDE SGDEGDDDEE QADRPANRRR RRGRRGRGRG
      181 RGEQGANDGQ DQPGDDGDDS PQKTGGNSTS SDDSEAQDGA DSEESDNGDD DNGSADGASR
      241 RRRRRRRRKS GAGDDGDEGP APDDPPNTVV HERAPRSGGK SGNSDSGDDS GGNEVKGIDG
      301 STRLEAKRQR RRDGRDAGRR RPPVLSEAEF LARREAVERV MVVRDRVRTE PPHPGSRYTQ
      361 IAVLEDGIVV EHFVTSAASA SLVGNIYLGI VQNVLPSMEA AFVYIGRGRN GVLYAGEVNW
      421 DAAGLGGADR KIEQALKPGD YIVVQVSKDP VGHKGARLTT QVSLAGRYLV YVPGASSTGI
      481 SRKLPDTERQ RLKEILREVV PSDAGVIIRT ASEGVKEDDI RADVTRLQER WNQIEAKAVE
      541 IKQKAAGAAV ALYEEPDVLV KVIRDLFNED FAGLVVSGDD AWDTINEYVS SVAPDLVSKL
      601 SKYEPAVGSE GQVGPDVFAV HRIDEQLAKA MDRKVWLPSG GTLVIDRTEA MTVVDVNTGK
      661 FTGSGGNLEQ TVTKNNLEAA EEIVRQLRLR DIGGIVVIDF IDMVLESNRD LVLRRLTEAL
      721 ARDRTRHQVS EVTSLGLVQL TRKRLGTGLI EAFSTSCPHC SGRGILLHAD PVDSAPTTGR
      781 KADSGGRRNR RSKKNRAEEP SEKEAVAKVP THAPGEHPMF KAMAASSSSE AEHGDGEVEE
      841 SGEELTAAVD DQTAVQVALD LGETEESEET DGSDETDETD ETDDFDDDSD DSDEDDDTDE
      901 TNDTDVDADE DEDTDEDVDG DEDTEDDDEL DDDLDEDDLD DDDDLDEDDD DLDDELDDDD
      961 SDSDDEDGES ELTEPAAGRP AALEVTTIAE RPRRRRAAGA GGPPIHLG
//