LOCUS BDN83110.1 313 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii cobalamin biosynthesis protein
CobD protein.
ACCESSION AP026367-3325
PROTEIN_ID BDN83110.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="cobD"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WP93"
/locus_tag="NJB1907Z4_C33250"
/transl_table=11
BEGIN
1 MVASARQART VGVLVGYLAD LVLGDPQRGH PVAVFGRLAA GLERASYRDT RAAGAVYVGV
61 LVGGVGLLGA VLGRPAGRPW SVAATAMATW VSLGGTSLVR TGREMAELLD RGDLDAARRL
121 LPSLCGRDPA QLDVPDLTRA ALESVAENTS DAQVAPLLWA AVGGVPAVLV YRAVNTLDAM
181 IGYRSPRYLR FGWAAARLDD LANYFGARVT AGLVVLCAPL VGGSALGAVR AWRRDAARHP
241 SPNAGVVEAA FAGALRVRLG GPTRYHFELQ IRPTLGDGGQ PTVDDLRRAV TLSRAVQAAA
301 AVGAGLFVYR RRP
//