LOCUS       BDN83091.1               480 aa    PRT              BCT 09-FEB-2023
DEFINITION  Mycobacterium pseudoshottsii putative cytochrome c oxidase
            subunit 1 protein.
ACCESSION   AP026367-3306
PROTEIN_ID  BDN83091.1
SOURCE      Mycobacterium pseudoshottsii
  ORGANISM  Mycobacterium pseudoshottsii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (bases 1 to 6051062)
  AUTHORS   Komine,T., Fukano,H. and Wada,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-2022)
            Contact:Takeshi Komine
            Nippon Veterinary and Life Science University, School of
            Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
            Japan
REFERENCE   2
  AUTHORS   Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
            Kurata,O. and Wada,S.
  TITLE     Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
            pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
            Japanese Sardine (Sardinops melanostictus) in Japan
  JOURNAL   Microbiol Resour Announc 11 (12), e00785-22 (2022)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/mra.00785-22
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Flye v. 2.9; galaxy v. 0
            Genome Coverage       :: 189x
            Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019-07-10"
                     /db_xref="taxon:265949"
                     /geo_loc_name="Japan:Tokyo"
                     /host="Sardinops melanostictus"
                     /isolation_source="liver of Japanese sardine"
                     /mol_type="genomic DNA"
                     /organism="Mycobacterium pseudoshottsii"
                     /strain="NJB1907-Z4"
     protein         /gene="ctaD_1"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:P9WP71"
                     /locus_tag="NJB1907Z4_C33060"
                     /note="frameshifted, insertion/deletion at around 3615289"
                     /transl_table=11
BEGIN
        1 MVFGFANLVL PLQIGAPDVA FPRLNALSFW LFVFGALIAL SGFIVPGGAA DFGWTAYTPL
       61 SNAAHSPGVG PDLWILGLAV GGLGTILGGV NMLTTVVCLR APGMTMFRMP IFTWNIMVTS
      121 LLVLMIFPLL TAALFGLAAD RHLGAHIYDP ANGGVILFQH LFWFFGHPEV YVIALPFFGI
      181 VSEVIPVFSR KPIFGYTTLV YATLSIAALP VAVWAHHMFA TGAVLLPFFS FMTFLIAVPT
      241 GLKFFNWIGT MWRGQLTFES PMLFSLGFLV TFLAGGLTGV LLASPPLDFH VSDTYFVVAH
      301 FHYALFGTIV FATYAGIYFW FPKMTGRLLD ERLAKFHFWL TFLGFHATFL VQHWLGNSGM
      361 PRRYADYLPT DGFQTLNVIS TIGAFTLGVS VLPFVWNVFK SWRFGEPVLV DDPWGHGNSL
      421 EWATSCPPPR HNFTELPRIR SERPAFELHY PHMVKRLRAE AHVGRHEIET DTSELAGSPT
//