LOCUS BDN82934.1 2407 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-3149
PROTEIN_ID BDN82934.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C31490"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MVVGRDREAL LAGLTGLARG EPGAGVVVGQ AAAVGKTVLV FPGQGAQWTG MGRQLLDESP
61 VFAERMRRCD EALAEFVSWS LLDVVAGVAG VAGVAGVAGV AGVAGAPGLD RVDVVQPLSW
121 AIMVSLAELW RSVGVTPDAV IGHSQGEIAA ACVAGALSLR DGAAVVALRS RLLVDLAGAG
181 AMASLACGVA RAEQLLAGFG DRLDLAAING VSAVVISGRV DAVLELMDLA ETQGVRARRI
241 EVDYASHSAQ VDAIAGPLME ALAGIEPRPS STSFFSTVTG GLMGTVELDG GLGRFWMSAG
301 QAHVAGVGMD WRAVYAGWGA RLVELPTYAF QRQRFWLPPA PTGSVDPAGL GLGEAGHGLL
361 CAAVEHPDSG EVILTGRLSL SAQPWLADHA VLGVMLFPGT GFLELVIRAG DVVGCTLVRE
421 LTMVAPLVLS RDVPVQVQVV VAPDGGDGSR SVTVYSHADR PDSGWLLNAQ GVLDVDVVQP
481 PAEVSEWPPV GAVRVEISDA YEQLAARGFE YGQAFRGCTA LWRRDQELFA EVALPEQVSA
541 QAGRFGIHPA LLDAALHAGL YGALDFGGSR AGNAEAVLPY SWQRVSLYAG GAERLRVRIT
601 PSASGTVSIE LADSAGGPVL SAGSLAVRPV GTAELRAALS AAARETDQGL LELAWSPITV
661 ESTSGGHRPV VLEWADYVAA DDDHAAGQAD VVLWRCEPAG GRVLDQAYRA THAALEVLQR
721 WLARDRSATL VIATHGAVGS AEHDITDLAG AAVWGLVRSA QTEHPGRIVL IDTDTAVVDL
781 AGLLATKEPQ LMVRAGRVHA ARLAAVEETL VLPTHQQWRL AAGGEGTLAG VVMEPNPQAQ
841 APLGPGQVRV AVAAAGVNFR DVLVVLGMYP GQAPPLGGEG AGVVVEVGHH VRRLSVGDQV
901 MGLVGVAGPE AVVDQRLLVK LPSGWSLAQA AGVPVAFLTA WYGLSDLAGV RSGESVLVHA
961 ATGGVGMAAV QLARHWGLEV FVTASRGKWD ILRRMGFDDD HIGDSRTVDF ADKFLAVTDG
1021 RGVDVVLNSL AGEFIDASLR LLARGGRFIE MGKTDIRDPH TIAQNHPRVT YRAFDLLESG
1081 PARIQAMLGA LLELFQARAL HPLPIKTWDV RCTPAAYRFV SQARHIGKVI LTMPTLLPDA
1141 LAAGTVLITG GTGMVAAALA RHLVSSHGVR HLVLVSRRGD AAAGASKLVD ELTAAGATVR
1201 VVACDVADPA AVSRLMNQLP EQCPPLSAVI HAAGTLDDAL ITSLTPQRVD AVLRAKVDGA
1261 WNLHEATRDL GLSAFVLCSS IAATLGAPGQ ANYAAGNAFL DALAAHRHAT GLAGISLAWG
1321 LWEQSSTMTA HLRGRDVDRM TRIGMRAISA EQAIELFDAA LVLDHPTVVT SRLDEAALAN
1381 PTISSQLPPL FNDLIRRPVR RRVDNDTMAA KSILAQRLND LAPERHRVAF IEMVCEQAAA
1441 VLGRPNGDDV DPEHTFRDLG LDSLTDLELR NRLKIISGLA LPPTLIVDYP TPQLLAGYLS
1501 QRLGENNGVP TDGGSRPSPA DPDDELRNTL ETIPIADLRD AGLSCPPMGM SGLSAAELAE
1561 LSDILARTGD QRDRDQAAGG LVGVEDVMAL TPLQQGLFAL AMFSESPVDD PYTIATTFDV
1621 LGQLDTVLLR NCATAMLYRH PNLRARFIYG DLPHPVQVVP SDVDLSWRQV VAMPEEVASL
1681 EADEQRSGFD LERGLTMRFL LVELPNERWR FVITAHHIVI DGWSLAVFVN ELFALYRAGG
1741 AIDVLAAPPR PFRDYLGWLD GWDSQSGEQF WRDYLAGLSA PTMLSRALAG GQGGQVAEEP
1801 QRIELCLGAE VTARLVDGAR SRGVTVNSLV QVAWALVLGA LTGRDDVVFG IAVSGRPSEL
1861 AGVQSMVGLF INTVPLRVRL DPQAVIADVC AAVRRDTALV REYAYFSHAW LRQAAGVGEM
1921 FDTLLVFENF PTGGLAVGKD VPVGAATFRR VAAHSPTHFP VTVTAEFARD QLTLMIAATG
1981 DALSVLTPET GLGVADLVQR LGRVLVAMTG DVGVRVSSLD VLDSVERVRL DGWGNRSVLG
2041 ASVPVGVSIP ALFDAQVVRG RDAVALSFEG QSLTYGELDE ASNRLARFLV GLGAGPGQRV
2101 ALVFGRCAQA VTAILAVLKT GAAYVPIDPG LPAARVQFMV ADAGPVAVVT TGGWGAGLDG
2161 CGCVVVDVAD AGVEACAGTG LVAPAADDIA YLIYTSGTTG IPKGVAVSHR NVVALVESLA
2221 SSVPVAGVWS QWHSYAFDVS VCEIWGALLS GGRLVVVPEQ VVGSPEDFLA LLVAERVSVL
2281 SQTPSAFYAL QGAVTVRSGL GRELRVEAVL LAGEAFEPQC AGVWLARRSG LARLINLYGT
2341 TETTVHASVR EIVGADVESA VSPIGVPLGH LGFFVLDGWL RPVPVGVGGS CMWLVLGWVW
2401 GIGGGGR
//