LOCUS BDN82652.1 703 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-2867
PROTEIN_ID BDN82652.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C28670"
/note="frameshifted, insertion/deletion at around 3140445"
/transl_table=11
BEGIN
1 MVDLPRNEQP FGGVINPVGA DSTPVTPSID YPPDGAPNVV VVLLDDVGFG APPTFGGPVP
61 TPTLDRIAQA GLRYNQFHTT ALCSPTRAAL LTGRNHHSAH MGTICEIAYG FPGYDSVLPQ
121 STATIAQILR MNGYNTALFG KAHFTPTWEI GPAGPFDRWP TGLGFERFYG FLGGDTSQYE
181 PALFDQTTPV EPYVGRDDYH LTEDLADKAI EWIQRQQTSA PDKPFLLYLA PGATHSPHHV
241 WPEWSDRFAG QFDEGWDALR EQTYARQLER GIIPPGTQLT PRPEQIPAWA DYDDRYKPVA
301 RRLMEVYAGF LAHTDAQIGR VVDAIDDLGQ WENTLFIYIC GDNGASAEGT VHGAWSSPSF
361 QNGLPEDPEW LLAHLADFGT VRCENHYNVG WAWALDSPFQ WMKQVASHFG GTRNGMAVSW
421 PRGITCAGEQ RSQFHHVIDV VPTILEAAGI EMPERVNGIE QKPIEGVSMR YSFDEADAHS
481 RRRTQYFEIF GNRAIYHEGW IASCFHGRLP WVRTQRTNPF GDSERWELYH LADDFSQGVD
541 LAEQYPDKLA ELQAVFDTEA RKYDVYPLSD ARLARALPAN RPNLHLGYLL PQPCADPRDL
601 DAALHQHLIR TAGAAADPTR RRPGGGHLHR WVNGRVEPVS ARRHPHVRLQ LLGPRTHHGR
661 RHRSASRGPD NPGAFVRLRR RGTGEGRVGH LARRRHHGGQ RTR
//