LOCUS BDN82510.1 945 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii glycine dehydrogenase (decarboxylating)
protein.
ACCESSION AP026367-2725
PROTEIN_ID BDN82510.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="gcvP"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:Q7VET8"
/locus_tag="NJB1907Z4_C27250"
/transl_table=11
BEGIN
1 MSDHSMFEST FADRHIGLDN QAIATMLAVI GVDSLDDLAA KAVPTRIFDT PTDSGLAPGL
61 DQLPPAASEA EALAELRALA DTNTTAVSMI GQGYYDTFTP QVLLRNIMEN PAWYTAYTPY
121 QPEISQGRLE ALLNFQTMVT DLTGLEIANA SMLDEGTAAA EAMTLMHRAT RSSTKHLAVD
181 ADLFTQTAAV LATRAKPLGI EIVTTDLRDG LPDGEFFGVI AQLPGASGRI TDWTALIQQA
241 HDRGALVSIG ADLLALTLLT PPGEIGADIA FGTTQRFGVP MGFGGPHAGY LSVHAKHARQ
301 LPGRLVGVSV DSDGNPAYRL ALQTREQHIR RDKATSNICT AQVLLAVMAA MYASYHGADG
361 LTGIARRVHG HAETIAGALG DALVHDTFFD TVLARVPDRA DEVVAAAKAS GVNLWRVDAD
421 HVSVACDEVT TAAHVTAVLD AFGVSAAKAA RAEIATRTSE FLTHPAFTNY RTETSMMRYL
481 RELADKDIAL DRSMIPLGSC TMKLNAATEM ESITWPELGR QHPFAPASDT PGLRRLITEL
541 QGWLAAITGY DEVSLQPNAG SQGEYSGLLA IHEYHASRGE PHRDICLIPS SAHGTNAASA
601 ALAGMRVVVV GCHDNGDVDL DDLRAKVGEH ADRLAALMIT YPSTHGVYEH DIADICAAVH
661 DAGGQVYVDG ANLNALVGLA RPGKFGGDVS HLNLHKTFCI PHGGGGPGVG PVAVRSHLAP
721 FLPGHPFAPG LPQGDPVSAA PYGSASILPI TWAYIRMMGA DGLRAASLTA IASANYIARR
781 LDEYFPVLYT GENGMVAHEC ILDLRGITKA TGVTVDDVAK RLADYGFHAP TMSFPVAGTL
841 MVEPTESESL AEVDAFCDAM ISIRAEIDRV GSGQWPVDDN PLRGAPHTAQ CLLVGEWDHP
901 YTREEAAYPL GTAFRPKVWP AARRIDGAYG DRNLVCSCPP VEAFA
//