LOCUS BDN82309.1 281 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii 16S/23S rRNA (cytidine-2'-
O)-methyltransferase TlyA protein.
ACCESSION AP026367-2524
PROTEIN_ID BDN82309.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="tlyA"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003408382.1"
/locus_tag="NJB1907Z4_C25240"
/transl_table=11
BEGIN
1 MARRTRVDAE LVRRGLARSR QQAAELISAG KVRIDGLPAV KPATAVAATA ALTVAADSER
61 GWVSRGAHKL IGALDAFGID VHGRRCLDAG ASTGGFTEVL LDRGAAEVVA ADVGYGQLAW
121 SLRTDPRVIV IERTNVRDLS PAAIGGQVDL VVADLSFISL TTVLPALAAC ALPHADIVPM
181 VKPQFEVGKG QVDAGGVVQD PALRAGAVLS VARRAGELGW HTVGVTASPL PGPSGNVEYF
241 LWLRAQTDRP LSDDTLSDAI QTAVAEGPGR EPAGHAERGP Q
//