LOCUS BDN82274.1 1435 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii polyketide synthase protein.
ACCESSION AP026367-2489
PROTEIN_ID BDN82274.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="pks8"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003911579.1"
/locus_tag="NJB1907Z4_C24890"
/note="frameshifted, insertion/deletion at around 2735435"
/transl_table=11
BEGIN
1 MTETTKHVDY LKRLTADLRR TRRRVAELED KLSEPVALVG MGCRYPGGAD SPESLWEMLT
61 QGRDAVSEFP SDRGWDIDAM FDPDPDARGK TYTRRGGFLA DAGDFDAGFF GVGPNEALAM
121 DPQQRLMLEV SWEALERSGI DPTTLRGSAT GVFVGVIHAG YGGEVKGELE GYGLTGSTLS
181 VASGRVAYVL GLEGLAVSVD TACSSSLVAL HLAAQSLRSR ECDLALVGGV TVMATPAAFV
241 EFSRQRALAA DGLCKAYAGA ADGTTWSEGA GVLVVERLAD AQRLGHPVLA VVRGSAVNQD
301 GASNGLTAPN GPSQQRVIRA ALASARLGVA DVDVVEGHGT GTVLGDPIEA EAILATYGQD
361 RTEPLWLGSI KSNIGHTSAA AGVAGLIKMV LAMQHGVLPQ TLHVDVPTPQ VDWSAGAVSL
421 LTESRPWPDL GRPRRAGVSS FGISGTNAHV ILEQAPTAEH DLAEPDRGAP TVPWVLSARS
481 APALANQAQR LLSWAEEHPD LDPVDVGWSL AATRSLFEHR AVVVGTDRTQ LMDGLAGVVA
541 GEHGAGAVVG RARSTGKTVF VFPGQGAQYL GMGRVLYERF SAFRTAFDAV AAELDAHLRL
601 PLRQVMWGTD EGLLESTEFA QPALFAVEVA LAALLSQLGV VPDLVLGHSV GEISAAHVAG
661 VLSLPDAARV VAARGRLMAG LAAGGAMVAV AASEQEVTPL LGSGVAAAAV NGPDSVVISG
721 PEGAVGEVVD RIAALGRRTH RLAVSHAFHS ELMDPMLPDF AEVLKGVSAS QPRISLVSNV
781 TGQLAEAGYG SAAYWVEHVR KPVRFADSVA LAESLGAAAF VEVGPSGGLT ALVEQSLTRE
841 TPAVPLLIKD RPENDALLLG LGQLFADGRA LDWREVFAGL GAQRTDLPTY GFVRRRYWLK
901 ELGVDQTKLT GAGLTGVGHP LLGAVVERPD VGGLVLTGVL SPELHPWLRD HTVDGVVLFP
961 GAGFVELALR AGDEVGCPLV QELTLLAPLA LPQTGTVRMQ LVVGGADESG RRTVSVFSST
1021 ADGDSWVLHA EGVLRASGVG HGVDLSVWPP VGASAVDVSD VYDRFAARGY GYGPAFRGLR
1081 SVWRRGREIY AEVVAPEDAT LQGFGIHPAV LDAALHAWGF ATATDQLMLP FSWQGVSLHA
1141 AGAARLRVRI TPADAGLVSV ELADPRGLPV LSVKQLVVRA VSGEALSAAV IAAGGTISGR
1201 LLEVAWSPTS PELSASDSAR DVVLWESGSA DGDVAVGQRV NEALAKLQSW LAGDDPGVLV
1261 VLTRGAVGLA GEGVTDLAGA AVWGLTRSAQ AEHPGRVVLV DTDDSVDIAD AVACGDPQLV
1321 VRSGVVHGGP VEIHRFRIRA GTAGRAVAVG RWRWGNARGC AGAAVSSSGP GRRPGAGRGR
1381 CGRGEFPGRA GGVGDVSRRW GVGCRGRRHG RRGWPRSGGP GRWRCGDGFG GCRGL
//