LOCUS BDN82132.1 2071 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii polyketide synthase protein.
ACCESSION AP026367-2347
PROTEIN_ID BDN82132.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="pks5"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_010950554.1"
/locus_tag="NJB1907Z4_C23470"
/transl_table=11
BEGIN
1 MGCRLPKGID SPEKFWTALL RGDDLITEIP ADRWDADEYY DPEPGVPDHS VSRWGGFLDD
61 VAGFDPEFFG ISEREAIAID PQHRLLLQTS WEAVEHAGMP PMSLSGSLTG VFVGMCHDDY
121 AFVTDDAGAL GDAYAFTGTA FSMASGRVSY ALGLRGPAMT VDTACSSSLL AVHMACRSLD
181 GGESDLALAG GCMLMLEPDV FSSASAQGML SPTGRCRTFD ASADGFVRSE GCAVLVLKRL
241 PDAVRDGDRV LAVLRGTATN QDGRTDNIST PSPDAQVAAY RAALAVAGVD ADTVGMVEAH
301 GTGTPVGDPI EFSSLAQVYG SNGNPCAVGS AKSSVGHTEA AAGAVGIIKA VLSLQHGLVP
361 PMVHHTRLPD ELAEIDSALF VPQAITPWPE GNGRTPRRAA VSSYGMSGSN VHVILEQAPE
421 PAVYRNGAAG LGDALLFTVS ASSTEALRQT ADRLADWIDN HEVSPSDLAY TLARRRSHQP
481 VRAGLIAGDR TELAHRLREA AAGDTPYPAA VGRDDLGPVW VFSGQGSQWA TMGASLLANE
541 PVFAATVAEL EPLIAAESGF SVTEAMTAME TVTGIDRVQP TLFAIQVALA QAMRSYGVHP
601 GAVIGHSLGE VAAAVVAGAL SLADGVKVIC RRSRLCTRLA GSGAMASVEL PAARVREDLV
661 RHRAKDVVVA VVASPQSTVI GGATDTVREL VAAWEEREVM AREVAVDVAS HTPQVEPILG
721 ELSELLADVE PLAPQVPYYS ATSFDPRERP RCDARYWVDN LRHAVRFSAA VRAALDDGYR
781 VFGELSPHPL LTRAVEQTAA SLDIPAAALP AMRRNQPLPH GLRGLVADLH SAGAAVDFAT
841 LCPDGQLVDA PLPVWANRRL LLTAADTRRH GCANSVAAHP LLGAHVDLLE EPVRHAWQSE
901 IGTATLPWLG DHQVNSVAAL PGAAYCEMAL TAANTVFGDL SEVGDIGFHE MLLLDDETAA
961 GAVALLEAPG IASFAVDTVR GGEKVRRSTA LLRAVERDSQ PAGYDIEALL AAHACRLDGD
1021 ELREWFGKTG IHYGPAFTGL VAAHVCERGS DAVLAEISLP GSMRTQQAGY LVHPALLDAC
1081 FQSVLAHPVV REMGNGGLLL PLGVRRLRSH ASTRDARFCY TRVTACGHDA EADIDVLDEH
1141 GTVLLAARGL LMGTGLSELA DQDRLMSRHL LGTEWQQREL PQPQAPNPES WLLVGISETA
1201 DRLTTRLAEA LKSLGTDCIT TSWHLQADHI TDAERFRDQL RDHRFAGVVV MTGTGCSSPV
1261 TSDYVRHVVR VVRELPEIMG EAPRLFVVTR GAQTVLGGES ANLEQAGLRG LLRVIGAEYP
1321 HLHTTHVDVD EHSGSEVVAR QLLSGSEEDE TAWRCGQWYT ARLSPMPLRP EERKTTVVEH
1381 GTEGMRLQIR TPGDLQTMEF VAFDRVAPGP GQIEVAVSTS SINFADVLVS FGRYNSPDGQ
1441 MPQLGTDFAG VVTAVGPDVT DHQVGDRVGG MSPHGCWATF VTCDGALATP IPAGLTDAQA
1501 AAVTTAHATA WYGLHDLGRI RAGDKVLIHS GTGGVGQAAI AIARAAGAEI YATAGSPKRR
1561 QVLRDMDIEH VYDSRSIEFA EAIRADTDGY GVDIVLDSLT GAAQRAGLEL LAWGGRFVEI
1621 GKRDIYGDTK MGLFPFRRNL SFYGVDLGML SITHPRLIRE LLTTVYQHTA EGVLPMPQDT
1681 HYPLAEAATA IRVMGAADHT GKLLLDIPSS GRSAVILPPE QVPVLRADGS YIITGGLGGL
1741 GLFLAEKMAT AGAGRIVLSS RSAPSQKALE TIELIRSIGS DVVVECGDIA QPATAARLVA
1801 NATATNLPLR GVLHAAAVVE DATLANITDE LLDRDWAPKV YGAWHLHQAT TDQPLDWFCS
1861 FSSAAAMLGS PGQGAYAAAN SWLDAFTHWR HNQNQPATAI AWGPWAEIGR AIALAESSDA
1921 AIAPDEGAYA FQTLLRHNRT YTGYAPIIGA PWVTAFAERS KFAEAFKALE QGRSGSSKFR
1981 SELDAPPLDE WPGQLRRMVA EQVSLILRRT IDPDRPLSEY GLDSLGNLEL RTRVQSETGI
2041 RISSTDITTV RGLADHLFAQ LAPEEAAASS Q
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