LOCUS BDN82038.1 1218 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii putative glycosyl hydrolase protein.
ACCESSION AP026367-2253
PROTEIN_ID BDN82038.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WN15"
/locus_tag="NJB1907Z4_C22530"
/transl_table=11
BEGIN
1 MKSFTIDPRR HDGVIFVLDG DGHEQSIWEP TVALARKLWQ VGVGTAVYSP ADESVRVLDA
61 AGLFEPEQVS APPQASRAKP YCVGLSAAAA KLGAAVQRLA VVAGMDGGVE AARECGFAFV
121 IGFDRDGRAE ELLRRGADVV AADLAEVTVR TGDERLSQCP NALDSYGQVI GMVAGRQLFV
181 CMDYDGTLSE IVSEPDAATL VDGAAEALAH LSTQCPVAIL SGRDLTDIRD RVGVPGIWYA
241 GSHGFELIAP DGTHHQHEAA AAAVDVLASA AKDLRHELAQ IPGVSVEHKR FGVAVHYRNV
301 AREHVAQVIA TTHRYRREYG LRVTSGRKVV ELRPDIDWDK GAALAWIRSL IFEDSRVLPM
361 YVGDDLTDED AFDALRFSGV GIVVRHDEDG DRPTAANFTL RNPNEVRDFV RRGAGWLAHA
421 HETQSRGWTF TFEGYDPPNE KLREALCTVG NGYFATRGAA PESKAGQVHY PGTYAGGVFN
481 RLDDLIGGTR TAHESLVNLP NWLPLTFRID GGDWFDVDAV TLLSYRQTLD LRGAVLTREL
541 TFRDDAGRTS SVTQHRFVSM NQAHVAALQT TIVGHDWSGT IEIRSTIDGN VRNSGVERYR
601 NLASNHLQGL QKAVLSENSV SMAVETTQSK IPVAVAARTS LWRADEPVAA TYRLLDEEFE
661 IGHEIFTEAK LGQPLTVEKI VTLVSGLDVA TSHPAIGAER RLGRQGRFAE ICDAHRIAWS
721 HLWERLSIEF SNHTEELRVL RLHLLHLLQT VSYNSADLDV GVPARGLHGE AYRGHIFWDE
781 LFIFPVLNLR LPAVTRSLLL YRYRRLLEAQ RAAKLAGYRG AMYPWQSGSD GREESPEQHL
841 NPRSGRWIPD ASHRAHHIGI AVAYNVWQFY QVTGDLAFMI DYGTEMMAEI ARFWVSRATY
901 DAERDRYHIK GVIGPDEFHS GYPDRPYDGV DDNAYTNVMA AWVILRAIDA LLLMPLPNRL
961 DLYEKLALTE EELAQWDHVS RRMFVPFHDG VISQFDGYEQ LAELDWDAYR QRYGNIQRLD
1021 RILEAEDDDV NRYRASKQAD ALMLLYLLSA DELGELLDRL GYHMERDQIP EMVDYYMART
1081 SHGSTLSAAV HGWVLARANR DRALEFFQQV LESDVADIQG GTTAEGVHLA AMAGSVDFVQ
1141 RCFTGLEIRA DRIVLSPHWP EYLGALGFPI HYRGNHLHLR VSGKGAEISV EPRDVPPVEV
1201 ECHGRVERLL PGSTVRFS
//