LOCUS BDN81893.1 686 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-2108
PROTEIN_ID BDN81893.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C21080"
/note="frameshifted, insertion/deletion at around
2293826,2294564,2294567,2293832,2293865,2294570,2293835,
229 4576,2294579,2293814,2293847,2294582,2293817,2293820"
/transl_table=11
BEGIN
1 MSFVGVAPEM VAVAASDLER LGSTISAANV AAAGSTTTIL AAGADEVSAV IAALFGTHAL
61 EYQAISTQLS VFHEQFVQTL TNGVGAYSAA ELVNVLPLQN VEQDLLNLVN APTQALFGRP
121 LIGNGADGAA GTGQAGAAGG ILWGNGGSGG SGAAGQAGGA GGAAGLIGNG GAGGASGLVG
181 NGAVGGAGGI GTTDGGAGGQ GGNARLFGTG GVGGHGGTGA GSGSGGAGGD GGLGGLVYGN
241 GGGGGAGGVG GAGGAGIVSV AAGSGGHGGT GGAAGLWGVG GHGGDGAHGG AGASGGAGDA
301 GSGGGDAGDG GAGGRGGWLV GGGGAGGSVG SGGSGGAGGS GANAVTLGSA GGNGGNGGDG
361 GAGGVGGAGG RGGWISFLSG QGAGGAGGDG GAGGGTGNGG DGAAGTFFGG TGAGGNGGHG
421 GDPGSGGAGG AGGAGSSAGA AGAGGLSPTT GGNGGNGGRG ADGYGTGISG ASGGAGGDGG
481 RYGNGGAGGA GGDGMGGASG SRSSFHPDKT VVAAASAGPA AKAAPVGWAA PWRVTAETVV
541 PAVMVARGAR EVAVRAGRTG SPARTPTVAA AVTAGPEVPA ARAVTVGWPV MRRRPDIPTV
601 SKAWAGPAGK VVPEGSRVMA APARPARLPM AAMASVAPAG TAATTAPAAR AGPAVVAPPP
661 VRTTHPGPRP HPAATAATAG AAPIPS
//