LOCUS BDN81817.1 435 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii ribonuclease D protein.
ACCESSION AP026367-2032
PROTEIN_ID BDN81817.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003413889.1"
/locus_tag="NJB1907Z4_C20320"
/transl_table=11
BEGIN
1 MCSALSPEGN EPPEGTAPEA TPLLSPASGV PELSVTAGQI EAAATLLDRG SGPFAVDAER
61 ASGFRYSNRA YLIQIRRAGA GTVLIDPVSH GGDPLTVLQP LAEVLAKDEW ILHSADQDLP
121 CLAEVGMRPS ALYDTELAGR LAGYDRVNLA TMVERLLGMG LVKGHGAADW SKRPLPSDWL
181 NYAALDVELL IELRSAISGV LAEQGKSDWA AQEFEYLRTF ESRWVPATAK PDRWRRTSGI
241 HKVRDRRGLA AVRELWITRD RIAERRDIAP RRILPDSAII DAALSDPKSV EDLVSLPVFG
301 GRNQRRNATM WLGALDVARK SQHPPEVAEP SNGPPVPARW SRRKPEAAAR LEAARAALSE
361 VSDSVGVPTE NLVTPELVRR LCWDWAPVAA AEITSTIDEF LATGQARVWQ RELVVPALAA
421 ALANAAEPET EPGAR
//