LOCUS BDN81803.1 668 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii DNA-binding protein protein.
ACCESSION AP026367-2018
PROTEIN_ID BDN81803.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003413917.1"
/locus_tag="NJB1907Z4_C20180"
/transl_table=11
BEGIN
1 MALVSKLSTA ARRLLIGRPF RSDRLSHTLL PKRIALPVFA SDAMSSVAYA PEEIFLMLSV
61 AGLAAYSMAP WIALAVAAVL LVVVSSYRQN VHAYPSGGGD YEVVSTNLGP TAGLVVASAL
121 MVDYVLTVAV SIASAMSNIG SAIPFVYDHK VFFAVAAILL VTALNLRGVR ESGLAFAIPT
181 YAFIIGISAM LGWGLFRIYV LGNQVRAESA GFVMHAEHGK VVGIALVFLV ARSFSSGCAA
241 LTGVEAISNG VPAFQKPKSR NAATTLLMLG AIAVALLMGV VALAVQTGAQ VVDDPDTQLT
301 GAPDGYQQKT LVAQLAQAVF GSFHLGFLMI AAVTALILVL AANTAFNGFP VLGSVLAQHS
361 YLPRQLHTRG DRLAFSNGII FLSAAAVGAV VAFRAELTAL IQLYIVGVFI SFTLSQIGMV
421 RHWTRLLRTE TDVAARRKMV RSRVVNSVGL VSTGAVLLIV LVTKFLAGAW IAIVAMGSVF
481 ILMKMIRRHY DTVNRELEEQ AAAHDNEVVL PSRNHALVLV SKLHLPTLRA LSYARATRPD
541 VLEAITVSVD DVETRELVRQ WEDSDVSVPL KVIASPYREI TRPVLDYVKR VSKESPRTVV
601 TVFIPEYVVG RWWEQLLHNQ SAFRLKTRLL FMPGVMVTSV PWQLTSSERI NTLEPHAAPG
661 DMRRGIFD
//