LOCUS       BDN81781.1               323 aa    PRT              BCT 09-FEB-2023
DEFINITION  Mycobacterium pseudoshottsii RNA polymerase sigma factor
            SigB protein.
ACCESSION   AP026367-1996
PROTEIN_ID  BDN81781.1
SOURCE      Mycobacterium pseudoshottsii
  ORGANISM  Mycobacterium pseudoshottsii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (bases 1 to 6051062)
  AUTHORS   Komine,T., Fukano,H. and Wada,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-2022)
            Contact:Takeshi Komine
            Nippon Veterinary and Life Science University, School of
            Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
            Japan
REFERENCE   2
  AUTHORS   Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
            Kurata,O. and Wada,S.
  TITLE     Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
            pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
            Japanese Sardine (Sardinops melanostictus) in Japan
  JOURNAL   Microbiol Resour Announc 11 (12), e00785-22 (2022)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/mra.00785-22
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Flye v. 2.9; galaxy v. 0
            Genome Coverage       :: 189x
            Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019-07-10"
                     /db_xref="taxon:265949"
                     /geo_loc_name="Japan:Tokyo"
                     /host="Sardinops melanostictus"
                     /isolation_source="liver of Japanese sardine"
                     /mol_type="genomic DNA"
                     /organism="Mycobacterium pseudoshottsii"
                     /strain="NJB1907-Z4"
     protein         /gene="sigB"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:P9WGI5"
                     /locus_tag="NJB1907Z4_C19960"
                     /transl_table=11
BEGIN
        1 MAQPIARGIV GRVDSDLDAQ SPAADLVRVY LNGIGKTALL NAEGEVELAK RIEAGLYAEH
       61 LLATRKRLGD NRKRELAAVV RDGAEARRHL LEANLRLVVS LAKRYTGRGM PLLDLIQEGN
      121 LGLIRAMEKF DYTKGFKFST YATWWIRQAI TRGMADQSRT IRLPVHLVEQ VNKLARIKRE
      181 IHQNLGREAT DEELAAESGI PVEKINDLLE HSRDPVSLDM PVGSEEEAPL GDFIEDAEAM
      241 SAENAVIAEL LHTDIRSVLA TLDEREHQVI RLRFGLDDGQ PRTLDQIGKL FGLSRERVRQ
      301 IERDVMCKLR HGERADRLRS YAS
//