LOCUS BDN81696.1 322 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii acyl-CoA dehydrogenase protein.
ACCESSION AP026367-1911
PROTEIN_ID BDN81696.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="fadE21"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003414139.1"
/locus_tag="NJB1907Z4_C19110"
/note="frameshifted, insertion/deletion at around 2101463"
/transl_table=11
BEGIN
1 MLVSELAGVS IGLLSTVAVS LGLGAATIMS RGTLAQKQRW LPELMTLEKI AAWAITEPDS
61 DSDAFGGMKT HVKRDGADYI LNGQKTFITN GPYADVLLVY AKLDEAGATS SDRRDRPVLI
121 FVLESGMAGL TQGKPFKKMG MMSSPAGELF FDNVRLTPDR LLGESEHHGD GDGRESARAN
181 FAVERLGVAL MALGIINECH RLCVDYAKTR TLWGKNIGQF QLIQLKLAKM EVARINVENM
241 VFQTLEKFKA GREPTLAEAS AIKLYSSEAA TDVAMEAVQL FGGNGYMAEY RVEQLARDAK
301 SLMIYAGSNE VQVTHIAKGL LG
//