LOCUS BDN81462.1 463 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-1677
PROTEIN_ID BDN81462.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C16770"
/note="frameshifted, insertion/deletion at around 1839016"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MSDAQGSRVG STFGPYRLTR LLGRGGMGEV YEAEHTVKEW TVAVKLMSET FSKDPVFRER
61 MKREARITGR LQEPHVVPIH DYGEIDGQMY LEMRLIEGTD LDNLLKRFGP LTPPRAVAII
121 TQVASALDAA HAAGVMHRDV KPQNILVTRE DFAYLVDFGI ASATTDEKLT QLGTAVGTWK
181 YMAPERFSND EVTYRADIYA LACVLHECLT GSPPYRADSA SMLVTAHMMD PIPQPSTVRA
241 GIPKAFDTMI ARGMAKQPGD RYASAGDLAL AAHEALNNPD QDHAADILRR SQEATLPGPP
301 DPAAPPTMPA TAATPPARPG PAATPPRPAP TPQQPPYYPA AAAPAAGSPP SGPSAVAGPP
361 RGVAPSGPAG TVRADTPAPG PRRPASPAGS RRAAPSPRAS PPPARRTTRE PVGAEHRRPA
421 NPPAHRPGIR ARRVRDRAAA THGRSWPPWR SCWFSSSVEL VSG
//