LOCUS BDN81386.1 354 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii succinyl-diaminopimelate
desuccinylase protein.
ACCESSION AP026367-1601
PROTEIN_ID BDN81386.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="dapE"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003406235.1"
/locus_tag="NJB1907Z4_C16010"
/transl_table=11
BEGIN
1 MLDLRGDPID LTAALIDIPS ESRDEARIAD EVEAALRAQT SGFEIIRNGN AVLARTRLNR
61 PSRVLLAGHL DTVPVADNLP SRRADGQLHG CGAADMKSGD AVFLHLAATV AEPVHDLTLV
121 FYDCEEIEAA ANGLGRIERE LPEWLSADVA ILGEPTSGYI EAGCQGTLRV VISATGTRVH
181 SARSWLGDNA IHKLSAVLDR LARYPARSVD IDGCTYREGL SAVRVDGGVA GNVIPDAASV
241 TVNYRFAPDR SVPAALQHVR EVFDGLDVQI EQTDAAAGAL PGLAQPAAKA LVEAAGGQVR
301 AKYGWTDVSR FAALGIPAVN YGPGDPNLAH CRDERVPVAT ITTVADTLRR YLST
//