LOCUS BDN81179.1 1539 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii ATP-dependent helicase protein.
ACCESSION AP026367-1394
PROTEIN_ID BDN81179.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="lhr"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003912132.1"
/locus_tag="NJB1907Z4_C13940"
/transl_table=11
BEGIN
1 MSTARPEPLG PEPLGRFSAI TREWFTNTFA APTPAQASAW AAIAAGDNTL VIAPTGSGKT
61 LAAFLWALDS LARCPDRTAG TRVLYVSPLK ALAVDVERNL RTPLAGLTRL AERRGLPPPQ
121 ISVGVRSGDT PPAVRRQLIT RPPDVLITTP ESLFLMLTSA ARETLAGVQT VIVDEIHAIA
181 ATKRGAHLAL SLERLDQLAP DRRVGPPAQR IGLSATVRPP EELARFLSGS APTTIVAPHS
241 AKTFDLAVQV PVADMANLAN NTIWPDVESR LVDLIESHNS TIVFANSRRL AERLTARLNE
301 IHAERSGMTL PSEANTQVAG GAPAQIMASG QTFGAAPLLA RAHHGSVSKE QRAQVEEDLK
361 RGALKAVVAT SSLELGIDMG AVDLVIQVEA PPSVASGLQR IGRAGHQVGE VSRGVLFPKH
421 RTDLLGCAIS VQRMRTGQIE TMRVPANPLD ILAQHTVAAA ALEPLDADQW FDTVRRSASF
481 ATLPRSVFEA TLDLLSGKYP STEFAELRPR LVYDRGTGTL TARPGAQRLA VTSGGAIPDR
541 GLFTVYLASE AEKPSRVGEL DEEMVYESRP GDVISLGATS WRITEITHDR VLVIPAPGEP
601 ARLPFWRGDD VGRPAELGAA LGALTGELAR LDRAEFDKRC AGLGFDDFAT DNLWGLLDDQ
661 KTATRVVPTD TTLLVERFRD ELGDWRVILH SPYGLRVHGP LALAVGRRLR DRYGLDEKPT
721 ASDDGIVVRL PDTISDTGTE TPPGAELFLF DADEIDAIVT AEVGASALFA SRFRESAARA
781 LLLPRRHPGR RSPLWHQRQR AAQLLDVARK YPDFPMVLET VRECLQDVYD VPTLTTLMTD
841 IAQRRVRVAE TETTKPSPFA ASLLFGYVGA FMYEGDVPLA ERRAAALSLD STLLAELLGR
901 VELRELLDPE VIAATGGQLQ HLCADRAARD AEGVADLLRL LGPLTEDEVA ARSDTTGGTD
961 IGGWLEGLRA ARRALEVSYA GHSWWVAVED IGRLRDGVGA AVPVGLPAAF TEAVADPLAE
1021 LLGRYARTHP PFTTAEAAGR FGLGLRVTAD VLGRLASDGR LVRGDFVATG VFGGAGSEQW
1081 CDAEVLRILR RRSLAALRAQ VEPVSTAAYG RFLPEWHQVG GADSGHGGID RLASVIDQLA
1141 GVRIPASALE PLVLAPRVRD YSPAILDELL ATGEVTWAGA GSISGSDGWV TLHLADSAPL
1201 TLAAPAEIEF GEAHRAILDT LAGGGAYFFR QLIGDIPDEA AIKAALWELI WAGRVCGDTF
1261 VPVRALLGGG GPGSRKRSAP AHRGHRPPRL SRYSVAHAQP RSVDPTVAGR WSLLPPPEPD
1321 STVRAHYQAE LLLNRHGVLT KGAVASEGVP GGFATLYKVL SAFEDAGRCQ RGYFVESLGG
1381 AQFAVAATVD RLRSYLDDPS AFTDSRRPQY QAVLLAAADP ANPYGAALPW PTSDDDGSNV
1441 GARPGRKAGA LVVLVDGALA WFLERGGRTL LTFTDDPEAN AAAAIALADL VATRRVGSLL
1501 VERINGVPVL QAGAGQASLA VTALADAGFL RTPRGLRLR
//