LOCUS BDN81151.1 443 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-1366
PROTEIN_ID BDN81151.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003898492.1"
/locus_tag="NJB1907Z4_C13660"
/note="frameshifted, insertion/deletion at around 1497572"
/transl_table=11
BEGIN
1 MRAQALRPTV SVDQHMIEHV FDIDDSVPLT RITAAARAEA RAAAERLAAI GDLFRLRLSQ
61 HGNREDWVAD TCDAVAAEVA AALNTSVAMG HSNLRYARAM RERLPQLGAE FRAGGIDFRL
121 FRTIVFRTDL ITDSDALAAV DARLAIKAPR WPSMTSWKLA TEVDRVVAKF DRDAVRRSRR
181 DAADRYVDCA PLEPGMALVN GQVFSATAEA LARRLDELAK TVCADDPRTV VQRRADALGT
241 LAAGQDRLIC DCGRTDCPAA GAPQQPSRVV IHVVAGRETV DGAGEAPGVL PSDGIIPAEI
301 VRELAKSAKL QPMSTPILAE TGYVPSPALM DFVRARDLTC RAPGCDRPAT QCDVDHTIPY
361 SDGGATHPSN LKCLCRKHHL LKTFWGWHDE QLPDATVIWS LPDGQTYVTT PGSAWLLPGL
421 FAPSPELPPP LGSRRITAEA ATR
//