LOCUS BDN81137.1 575 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii succinate dehydrogenase flavoprotein
subunit protein.
ACCESSION AP026367-1352
PROTEIN_ID BDN81137.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="sdhA"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:A0QT08"
/locus_tag="NJB1907Z4_C13520"
/transl_table=11
BEGIN
1 MIVGAGGAGM RAAVEAGPRV RTAVLTKLYP TRSHTGAAQG GMCAALANVE DDNWEWHTFD
61 TVKGGDYLAD QDAVEIMCKE AIDAVLDLEK MGMPFNRTPE GRIDQRRFGG HTRDHGKAPV
121 RRACYAADRT GHMILQTLYQ NCVKHDVEFF SEFYALDLAL TETPSGPVAT GVIAYELATG
181 DIHIFHAKAI VLATGGSGRM YKTTSNAHTL TGDGIGIVFR KGLPLEDMEF HQFHPTGLAG
241 LGILISEAVR GEGGRLLNGE GERFMERYAP TIVDLAPRDI VARSMVLEVL EGRGAGPHKD
301 YVYIDVRHLG EDVLEAKLPD ITEFARTYLG VDPVHELVPV YPTCHYVMGG IPTTVTGQVL
361 RDNTHVVPGL FAAGECACVS VHGANRLGTN SLLDINVFGR RAGIAAARYA RGHDFVDMPA
421 EPASMVVSWV ADILSEHGNE RVADIRGALQ QTMDNNAAVF RTEETLKQAL TDIHALKERY
481 SRITVHDKGK RFNSDLLEAI ELGFLLELAE VTVVGALNRK ESRGGHARED YPNRDDVNYM
541 RHTMAYKEGT DLLSDIRLDF KPVVQTRYEP KERKY
//