LOCUS BDN80807.1 526 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii 2-succinyl-5-enolpyruvyl-
6-hydroxy-3- cyclohexene- 1-carboxylate synthase protein.
ACCESSION AP026367-1022
PROTEIN_ID BDN80807.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="menD"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WK11"
/locus_tag="NJB1907Z4_C10220"
/transl_table=11
BEGIN
1 MVLCPGSRNA PLAFALQDAD RSGRIRLHVR IDERTAGFLA IGLAVGAGAP ACVAMTSGTA
61 VANLGPAVVE TNYARVPLIV LSANRPYELL GTGANQTMEQ LGYFGTQVRA TISLGLAEDA
121 HERLDSLNAS WRSATCRVLA AAMGSRTANA GPVHFDIPLR EPLVPDPDPH GAVTPPGRPE
181 GRPWTYTPPV TFDQPLEIDL SADTVVIAGH GAGVHPNLVQ LPTIAEPTAP AAPSGGNPLH
241 PLALPLLRPR QVIMLGRPTL HRPVSALLAD PEVPVFALTT GPRWPDVSGN SQATGTRAIV
301 TGTPNPSWLD RCAQMNRHAV AAVREQLAAH PLTTGLHVAA AVAGALRPGD QLVLGASNPV
361 RDAALVGLDT AGLRVRSNRG VAGIDGTVST AIGAALGYER DHHGRTVALI GDLTFVHDSS
421 GLLIGPTEPT PRQLAIVVSN DNGGGIFELL EQGDPRFSDV SSRIFGTPHD VDVGALCRAY
481 HVENRQIEVD QLPAALDEPG SGLRVLEVKA DRSSLRQLHA AIKAAL
//