LOCUS BDN80749.1 317 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii porphobilinogen deaminase protein.
ACCESSION AP026367-964
PROTEIN_ID BDN80749.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="hemC"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WMP3"
/locus_tag="NJB1907Z4_C09640"
/transl_table=11
BEGIN
1 MAHVIRIGTR GSLLATTQAA TVRDALIANG HAAELVTIST LGDRSSAPIE TLGVGVFTTA
61 LREAIEDGRV DAAVHSHKDL PTAQDPRFTI AAIPPRQDPR DAVVARDGLV LGELPVGSLV
121 GTSSPRRAAQ LRALGLGLEI RPLRGNLDTR LNRVSNGDLD AIVVARAGLA RLGRLDDVTE
181 TLEPVQMLPA PAQGALAIEC RAGDSRLATV LAELDDADTR AAVTAERALL AELEAGCSAP
241 VGAIAEVVES IDEEGRVFEE LSLRGCVAAL DGSDVIRASG IGTSGRAREL GLAVAAELFE
301 LGARELMWGE GNSPQGS
//