LOCUS BDN80706.1 420 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii L,D-transpeptidase 5 protein.
ACCESSION AP026367-921
PROTEIN_ID BDN80706.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="lprQ"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WKV3"
/locus_tag="NJB1907Z4_C09210"
/transl_table=11
BEGIN
1 MALGAGVLAP NVLAACSGKV AKQAEQKAPE APRLIFRPTD AAGDVLPIDP VSVEVGNGWF
61 QRVVLKNPSG KVIAGAYNQE RTVYTVTEPL GYDTTYTWSG AAVGHDGKAI PVGGKFTTVT
121 PDKQIDGGFQ LADGQTVGIA APVIIQFDAP ITDKATVERA LHVTTNPPVE GSWAWLPDEA
181 KGARVHWRPR EYYPAGTTVS VDAKLYGLPF GDGAYGAQDM TLNFQIGRRQ IVKAEVPSHR
241 IQVVTDEGVI MDFPCSYGEA DLARNVTRNG VHVVTEKYSD FYMSNPAAGY SNVHERWAVR
301 ISNNGEFIHA NPQSAGAQGN SNVTNGCINL STSNAEEYFH SAIYGDPVEV TGSTIELSYS
361 DGDIWDWAVD WDTWLSMSAL PAPSARTPGT QIPITAPATP STAPSLSGTP TTPSTTTPGG
//