LOCUS BDN80682.1 468 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii dihydrolipoyl dehydrogenase protein.
ACCESSION AP026367-897
PROTEIN_ID BDN80682.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="lpdC"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:UniProtKB:P9WHH9"
/locus_tag="NJB1907Z4_C08970"
/transl_table=11
BEGIN
1 MVGAVTHYDV VVLGAGPGGY VAAIRAAQLG LNTAIVEPKY WGGVCLNVGC IPSKALLRNA
61 ELAHIFTKDA KAFGISGEAT FDYGVAFDRS RKVAEGRVAG VHFLMKKNKI TEIHGYGKFT
121 DANTLSVDLN DGGTEKVTFD NAIIATGSST RLVPGTSLST NVVTYEEQIL TRELPKSIII
181 AGAGAIGMEF GYVLKNYGVD VTIVEFLPRA LPNEDAEVSK EIERQFKKLG VKIRTGTKVE
241 SISDDGSAVT VVVSKDGKSE ELKADKVLQA IGFAPNVEGY GLDKAGVALT DRKAIGIGEY
301 MQTSVGHIYA IGDVTGQLML AHVAEAMGVV AAETIAGAET LSLGDYRMLP RATFCQPQVA
361 SFGLTEQQAR DEGYDVKVAK FPFTANGKAH GLGDPSGFVK LVADGKHGEL LGGHLVGHDV
421 SELLPELTLA QKWDLTATEL ARNVHTHPTM SEALQECFHG LAGHMINF
//