LOCUS BDN80616.1 832 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii MFS transporter protein.
ACCESSION AP026367-831
PROTEIN_ID BDN80616.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003900661.1"
/locus_tag="NJB1907Z4_C08310"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MASSVALVAF VASSRSHPTP LIDPAFLRVR SFVAGNLLTL VAAAGFYCYV LTHVLYLNYV
61 WHYSLLKAGF AIAPAALIAA VVAAVLGRIA DQRGHRLVVM AGAIIWAGSL VWYLQRVGTE
121 PNFLREWLPG QLLQGIGVGT TLPVLGSAAL AGLTKGGSYA TASAVVSTTR QLGAVIGVAL
181 LVILIGKPAP GTGVDALRHG WVLAAACFAA VAVLAGFLGR TQQGADVAGA PESGVARAPA
241 RPQPVTPRPA AAPARLPQTT ADGDLLRQLP LFAGLPAATM AELRHHTDEI ELQAGSYLFH
301 EADPSDALYV VRSGRLRVVQ RDLVLRELGR SEVVGELGLL IDAPRSASVQ AMRDSVLIRL
361 SKAQFNRIAD RGVLAALVGT LATRLHTAPP PTVGRPASPE AVIAVIGLGA AVPVRPVALA
421 LLNALSARVT AVDPGRVDRA GLERAEASAD KVVLHASAND SGWRDFCLRA ADRIVLVSEG
481 PAPRDTQLPA RAVGADLVLI GAPASQEDRS RWEELISPRS VHSVSYRSLK DDVRPLAARI
541 TGGSVGLVLG GGGARAFAHL GVLDELEAAG IVVDRFAGTS MGAVIAALAA SGLDAAGVDA
601 HVFEYLVRHN PLGDYTLPSK GLVRGRRTMA LLREAYSGRM VEELPKEFRC VSVDLLARQA
661 VVHRRGPVAE VVGCSLRVPG LYPPQIYNGQ LHVDGGVLNN LPVTALTRAE GPMIAVSVGF
721 GGNPSGGQPR RSGPIQVPGI GDTLMRTMMM GSRTVADAAQ AEALVVIRPD TRAVGLLEFH
781 QIDAAREAGR AAARAALPQI IPLLRSGPAG QTTGRAIDRS ARALRTDARR PA
//