LOCUS BDN80595.1 1258 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii polyketide synthase protein.
ACCESSION AP026367-810
PROTEIN_ID BDN80595.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /gene="pks6"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003911169.1"
/locus_tag="NJB1907Z4_C08100"
/transl_table=11
BEGIN
1 MGAAAADWLG DEQETIYGCF LEDVEGFDNK FFDIPPDEAA LMDPQQRLRL ETSWAALEHA
61 GILPKTLKLS HTGVFVGVSS TDYVRLLFPG GRKPTIWDNT GGSSSIIANR LSYFLDVNGP
121 SLVIDTACSS SLVAAHLARK SLASGECDLA VVAGTNVLIS PEVWRGFQEA GVVSPTGSCR
181 AFDARADGMV RGEGCGVVVL ERLSDARRAG RTVLAVLTGS AVNQDGRSNG IMAPNPRAQI
241 SVLDSACKCA DIDPAEIDYV EAHGTGTSVG DRIEAHALGQ VFGRGRQAAK PLMIGSIKPN
301 IGHLEGAAGI AGLIKTVLML QRGQLLPSGA FEVPNPNIPF AELGLAVVEE FQEWPAVVGR
361 PRRAGVSSFG FGGTNAHVIV EQAVERVVER VVEVGPGVLA WVVSARTAAG VGAQAGRLLE
421 FVRAGRELDA GDVGYSLVTT RSLFEHRAVV VGAGRDELLA GLAEVVEGRP GVGVASGVAM
481 PGGKTVFVFP GQGAQWLGMG RESCAGYPVF AAAFDAVVAE LDRHLARPLR EVVWGADAEL
541 LNTTEFAQPA LFAVEVALYR LLESWGMRPG LVMGHSVGEL SAAHVSGVLD LADAALLVVM
601 RGRLMQALPG GGVMYAVQAG EQELRPLLGE QVSVAAVNGP GSVVLSGARE AVSVVVDRLA
661 AQGRRVRRLA VSHAFHSVLM EPMLEQFRAV ADEVYAGRPA IPVISNVTGQ LVAEDYGSAD
721 YWVRHIREAV RFADSVCFAH SAGATRFVEV GPAGGLTPLI EESLAQVSVV AVPTLRKDRP
781 EPFAVVGAVA QAFVRGAGVD WASVLAGCGG QRVGLPTYAF AHERFWLADR FGVGQQVCVG
841 QVLADEAGPG AHEAAGAAVG QGFAARLQGL SDAEQQAAVL AMVCEHTAAV LGRDGAAQLD
901 AGQAFSDAGL TSLSAVELRN RLKTLTGVTL SATTAFDYPT PTQLADHLLS HLHHQNPTGA
961 TPELDRVDAL TDLFLQTCDA GRDDDGWQIV ALAANGRERM TTPVPKREWK EVVLLAGGGS
1021 DVAVVCLPTL TVLSSPHAYL DVARAMAGRH SVHALSLPGF DPDDALPQDR EVVLEGAAQA
1081 ILHAVGDHPH LVLAGSSSGG VLAHALGSYL AERHQRTPLG VALIDTYLPS QIVNADNPDQ
1141 VGVNETGALF SRRVTSMARE LDQLNATRLT AAASYAALFG TWEPVVSAVP LLNMIAMDET
1201 AACERVRAER INRWRVATAE ASYSVVEVPG DHFDMITTSS DATTTALHGW ISGLIRAG
//