LOCUS BDN80521.1 891 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-736
PROTEIN_ID BDN80521.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C07360"
/note="frameshifted, insertion/deletion at around
811973,811989,811414,812026,811420,811423"
/transl_table=11
BEGIN
1 MLLPPEINSA RMHLGAGPGP MLAAATAWDG LAAELFAAAS AFGAVTSGLA GGSWQGPAST
61 AMASAAQPYL VWLTTASAQA EQAASQVRAA LASFEAALVA TVSPPAIDAN RTVLTALVNA
121 NVLDLAAPAI AAVEAQYEQM WAQDVAAMLG YHAGASAAAP ALTPFAVSGL VRQLGNAAAA
181 SLASAAPASA AVAAAAEAAV ADPVSALGLP SLGLAAATPL NLGAANVGTS NLGFGNIGSG
241 NIGNGNNGDG NLGGGNLGSY NLGWGNLGGA NQGFGNAGSN NQGFANTGSF NVGFGNTGSN
301 NIGIGLSGDG KIGFGSLNSG SGNIGLFNSG TNNIGFFNSG TGNFGVLNSG SYNTGFGNSG
361 EASTGVFNPG NANTGWANTG NHNTGSFNAG NTNTGGFNPG NLNTGWANTG DVDTGAFISG
421 SYSNGLFWQD DYRLLGIDLK INFGGTSGDY AVSIPLDNTF SATVPTITTP GTTIPKQTFL
481 NGGYIGPITI PSITIVGPPI NATVGPATLD LSLSYDVSPI QLQLLYIPPT TGLGNTSSSP
541 SSGFFNQGDG GSSGLFNTTS GPFGVSGLLN YGDLESGALN FGNTISGIHN TSGLELATLE
601 PARISGVGNI GSDLAGVFRD GPDATTFNVG VGNDGGLNFG SANIGDYNFG NANIGNLNLG
661 SANIGFGNVG DYNLGSGNLG SANIGFGNAG PGLTAAFNNI GFGNTGDNNI GFGNTGNGQH
721 RRRQPGRLQH RLVEPGRLQH RTGKRRQRQH RRPDQRQLRQ RHLVEIRLPG ARRLQLRDWP
781 GAHHHQPQPQ RPDRHPHQRH RRQHRDRGLH HSGDPDRRVR SGQRQHRAGN LPDHHDCRSN
841 DRHRRGRDTV RVHAQLCCRH GAGPGDRPRP AFWPGSRQFD QRRVVGFLQL G
//