LOCUS BDN80495.1 985 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-710
PROTEIN_ID BDN80495.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C07100"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MSYVVAIPDM LASAAADVAG IGSSVGAANT AAVGATTGVM AAADDEVSVA IAALFSGHGQ
61 AYQAISAQAA AFHDQFLRAL TGAGGAYAAA EAANASPLQA AEQEVLAVIN APTNALLGRP
121 LIGNGTDGLA GTGAAGGAGG LLWGNGGNGG SGAAGQAGGA GGAAGLIGTG GAGGMGGAGG
181 GAGGMGGSGG WLLGNGGAGG AGGVGGAGVG GGVGGTGGNA VLFGNGGAGG MGGAGADGAV
241 GAAGTAGTST SAGGVGGAGW DATAAGVLAA TGGDGGDSGG GGAGGDGGAG GAGGHGSALF
301 GAAGANGNGG AGGAGGNPGA PGNGGTGGVG PDAATSGGMG GTGGDPGAVG GGGNSGAAGG
361 AGAVAGASGA AGTIIAGNGG NGGAGGTGYA ADGPAGPAIG NGGDGGHGGA GGFYGNGGAG
421 GAGGNSAPGG GNGGNGGTGG DSGAMGSSGG RGGDGGVGTN GGAGGGGGNA TSYGTANATG
481 GAGGDGGAGS RGTGGTGGAG GGGGAAQILN GASAATATGG AGGAGGDGND GGNAGVGGAA
541 STRGTGNVTG GTGGDGGTGS TGNGGSGGDG GNVEVNNDAS TVSFVGGAGG HGGDGATDGG
601 AGGDGGRTTI DGAGSRATAT GGTGGDGGNG GTGHGGGGGP GGTAINYGAG DAFGGAAGKG
661 GTGVVGGNGG SGGAAYNYGT GNATGADGAA GTDGTTGAGG SGGSAAAASV LNSASTATAT
721 SGSGGAGGDG TDGGNGGSGG FAFTFGTGNI IAGVGGDGGT GSTGVGGIGG SGGGADINNG
781 ASTVVPQGGA GGHGGDGATD GGAGGAGGFT EIDSSASVLA ATGGAGGDGG SGGTGRGGTG
841 GVGGVGINNG SGEAIGGAPG AGGTGAVGGD GGQGGAAYTL NGASTATATG GIGGNGGDGG
901 TANGSNGGNG GAGGYASTTG TGTASAGNGG RGGDGTATVA TGGTGGVGGN AHAPAGSPVP
961 GVGGKGGNPG PGGKPGPNGA DGIVV
//