LOCUS BDN80389.1 1392 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii membrane protein protein.
ACCESSION AP026367-604
PROTEIN_ID BDN80389.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_010950366.1"
/locus_tag="NJB1907Z4_C06040"
/transl_table=11
BEGIN
1 MAAVSLALTF AQSPGRVSPD TKLDLTANPL RFLARATSLW NSELPFGQSQ NQAYGYMFPH
61 GTFFLVGHLL QLPGWITQRL WWALLLTIGF WGLLRVAEAL GIGSPTSRII AAAAFALSPR
121 VLTTLGSISS ETLPMMLAPW VLLPTILALR ATSERPLRTL AAQAGLAVAL MGAVNAIATL
181 AGCLPAMIWL ACHRPNRRWW RYTAWFMLAL LLATLWWLVA LTQLRGVSPP FLDFIESSGV
241 TTQWSSLVEM LRGTDSWTPF VAPNATAGAP LVTGSVAILG TCLVAAAGLA GLASREMPAR
301 GRLVTMLPVG VVLLAVGYSG GLGSPLAHQV QAFLDAEGTP LRNVHKLGPV IRLPLVLGLA
361 ELLGRIPLPG SAPKPVWLGA FAHPERDKRV AAGIVALTAL LVSTSLAWTG RLTPPGTFTA
421 IPAYWHQAAD WLSEHNTGAP APGRVLVVPG APFATQVWGT SHDEVLQVLG ASPWGVRDSI
481 PLTPPQTIRA LDSVQRLIAS GRPSVGLADS LARQGISYLV LRNDLDPESS RSARPILAHR
541 AITGSPRLQK VAEFGEPVGP GSLAGFVNDS GLRPRYSAIE IFRVIDQVGG AGNPGAPYFA
601 DTASLPRVDG GPEVLLRLDE RRRLLGQTAL GPVLLTQDAR AAQLPVPVVT VTDTPVARET
661 DYGRVDQHSS AVRAPGDARH TYNRVPDYPV PGAEVVYGGW TGGRITVSSS SSDSTAMPDV
721 APGASVAAAV DGDPATAWVS NALQAAVGQW LQVDFDHPVT NAVITLTPSP TAVGAQVRRI
781 LVETVNGSTT LRFDDAGKPL TAALPYGETP WVRITAAGTD DGSPGVQFGI TDLTITQYDA
841 SGFAHSVQLR HTVLVPGPPP GAEIARWDLG SELLGRPGCA PAPDTMRCAA SMALAPEEPV
901 NLSRTLTVPH PMTVTPTVWV RPRQGPKLAD LIAQPDTTRA RGDSDGLEVL GSAYAATDGD
961 RATSWTAPQR VVQRKTPPTL TLTLPRPTEV TGLRVAPSRS ALPAHPTMVA INLGDGPQIR
1021 SLSPDGGPQT VSLHPRVTGT VTVSLLDWED VIDRNALGFD QLKPPGLAEL VVLGAGGRPI
1081 APADAAHNRA REVRIGCDHG PVIAVAGRFV HMSVRTTVGA LLDDEPIQAQ PCEPEPIALP
1141 PGQQELLISP GTQFVVDGAQ LTPPAAGELP GAAAVPAETG AWSATRREVR APASQTPRVL
1201 VIPESINPGW VARTGAGAQL TPVAVNGWQQ GWVVPAGDPG TITLSFAANS LYRAGLAIGL
1261 SLLPVLVLLV LWRARRRGPD DPPARPWTTG WAAAVAALAA GALIAGPLGA VLVGAALGVC
1321 YALRRRERLR DRLTIATSAG GLILAGAALS RHPWRSVDGY AGHSAIVQLL ALISIAALVA
1381 ATVAPGLTRG EK
//