LOCUS BDN80323.1 388 aa PRT BCT 09-FEB-2023
DEFINITION Mycobacterium pseudoshottsii hypothetical protein protein.
ACCESSION AP026367-538
PROTEIN_ID BDN80323.1
SOURCE Mycobacterium pseudoshottsii
ORGANISM Mycobacterium pseudoshottsii
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
ulcerans group.
REFERENCE 1 (bases 1 to 6051062)
AUTHORS Komine,T., Fukano,H. and Wada,S.
TITLE Direct Submission
JOURNAL Submitted (27-JUN-2022)
Contact:Takeshi Komine
Nippon Veterinary and Life Science University, School of
Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
Japan
REFERENCE 2
AUTHORS Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
Kurata,O. and Wada,S.
TITLE Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
Japanese Sardine (Sardinops melanostictus) in Japan
JOURNAL Microbiol Resour Announc 11 (12), e00785-22 (2022)
REMARK Publication Status: Online-Only
DOI:10.1128/mra.00785-22
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Flye v. 2.9; galaxy v. 0
Genome Coverage :: 189x
Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2019-07-10"
/db_xref="taxon:265949"
/geo_loc_name="Japan:Tokyo"
/host="Sardinops melanostictus"
/isolation_source="liver of Japanese sardine"
/mol_type="genomic DNA"
/organism="Mycobacterium pseudoshottsii"
/strain="NJB1907-Z4"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NJB1907Z4_C05380"
/note="frameshifted, insertion/deletion at around 580847"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MVPEEILTDH PDRFRAMIVE SANPAHSLAD SAACRQAFEA LELMVVIDVA MTETARLAHY
61 VLPAASQFEK PEATFFNLEF PHNAVHLRRP LLDPLPGTLP EPEIWARLVR ALGFVTDDDL
121 RPLREAAQRG RQAYTEAFLV AVASNPSVAK LLPYVLYETL GPTLPDGMAG AAALWGLAQK
181 TAMTYPDAVR RAGHTDGNAL FDAILNGRSG VTFTAHNYED DFELINNDDH KIALGIPEML
241 DEIRSLADLK MSLTTTELPI VLSVGERRAY TANDIFRDPS WRKRDADGAL RVSVEDAQAL
301 GLTDGCRARI TTAAGAAEAT VEVTEVMLPG HASLPNGFGL DYVDGDGRTV VPGVAPNALT
361 STKWRDPYAG MPWHKHVPAR IEACRADA
//